Contributions of protein microenvironment in tannase industrial applicability: An in-silico comparative study of pathogenic and non-pathogenic bacterial tannase
Tannase is an inducible industrially important enzyme, produced by several
microorganisms. A large number of bacteria have reported as tannase producers; however …
microorganisms. A large number of bacteria have reported as tannase producers; however …
[HTML][HTML] Analysis of salt-bridges in prolyl oligopeptidase from Pyrococcus furiosus and Homo sapiens
AK Bandyopadhyay, RNU Islam, D Mitra… - …, 2019 - ncbi.nlm.nih.gov
Hyper thermophilic archaea not only tolerate high temperature but also operate its
biochemical machineries, normally under these conditions. However, the structural …
biochemical machineries, normally under these conditions. However, the structural …
[HTML][HTML] Insights from the salt bridge analysis of malate dehydrogenase from H. salinarum and E. coli
AK Bandyopadhyay, RNU Islam, D Mitra… - …, 2019 - ncbi.nlm.nih.gov
Halophilic proteins have greater abundance of acidic over basic residues in sequence. In
structure, the surface is decorated by negative charges, with lower content of Lysine. Using …
structure, the surface is decorated by negative charges, with lower content of Lysine. Using …
[HTML][HTML] PROPAB: Computation of Propensities and Other Properties from Segments of 3D structure of Proteins
RNUL Islam, C Roy, PSS Gupta, S Banerjee… - …, 2018 - ncbi.nlm.nih.gov
Residues in allelic positions, in the local segment of aligned sequences of proteins show
wide variations. Here, we describe PROPAB that computes the propensity tables for helix …
wide variations. Here, we describe PROPAB that computes the propensity tables for helix …
[HTML][HTML] POWAINDv1. 0: A Program for Protein-Water Interactions Determination
S Banerjee, B Mondal, RNU Islam, PSS Gupta… - …, 2018 - ncbi.nlm.nih.gov
Protein is the most exposed biomolecule in the aqueous environment of the cell. Its structure
maintains a delicate balance between the rigidity and the flexibility that imparts binding …
maintains a delicate balance between the rigidity and the flexibility that imparts binding …
[HTML][HTML] Comparative physicochemical and evolutionary study of SARS-CoV-2 and SARS with special reference to salt bridge and their microenvironment: A plausible …
D Mitra, AK Pal, PKD Mohapatra - 2020 - europepmc.org
The occurrence of concentrated pneumonia cases in Wuhan city, Hubei province of China
was first reported on December 30, 2019. Currently, it is known as COVID 19 and now it is a …
was first reported on December 30, 2019. Currently, it is known as COVID 19 and now it is a …
[HTML][HTML] Structural insights from water-ferredoxin interaction in mesophilic algae and halophilic archaea
AK Bandyopadhyay, RNU Islam, D Mitra… - …, 2019 - ncbi.nlm.nih.gov
We analyzed the water-ferredoxin interaction in mesophilic (moderate temperature) algae
(PDB ID: 1AWD) and halophilic (salt-tolerant) archaea (PDB ID: 1DOI) using POWAIND …
(PDB ID: 1AWD) and halophilic (salt-tolerant) archaea (PDB ID: 1DOI) using POWAIND …
[引用][C] 107 Structure, salt-bridge's energetics and microenvironments of nucleoside diphosphate kinase from halophilic, thermophilic and mesophilic microbes
D Mitra, AK Bandyopadhyay*, RNU Islam… - … and Biological Sciences - Routledge