Energy-driven genome regulation by ATP-dependent chromatin remodellers

S Eustermann, AB Patel, KP Hopfner, Y He… - … Reviews Molecular Cell …, 2024 - nature.com
The packaging of DNA into chromatin in eukaryotes regulates gene transcription, DNA
replication and DNA repair. ATP-dependent chromatin remodelling enzymes (re) arrange …

Post-translational modifications of histones that influence nucleosome dynamics

GD Bowman, MG Poirier - Chemical reviews, 2014 - ACS Publications
Nucleosomes are efficient DNA-packaging units. The fundamental protein unit of the
nucleosome is the histone dimer, a simple α-helical domain possessing a highly basic …

Chromatin remodelling: the industrial revolution of DNA around histones

A Saha, J Wittmeyer, BR Cairns - Nature reviews Molecular cell biology, 2006 - nature.com
Chromatin remodellers are specialized multi-protein machines that enable access to
nucleosomal DNA by altering the structure, composition and positioning of nucleosomes. All …

A packing mechanism for nucleosome organization reconstituted across a eukaryotic genome

Z Zhang, CJ Wippo, M Wal, E Ward, P Korber, BF Pugh - Science, 2011 - science.org
Near the 5′ end of most eukaryotic genes, nucleosomes form highly regular arrays that
begin at canonical distances from the transcriptional start site. Determinants of this and other …

Opposing chromatin remodelers control transcription initiation frequency and start site selection

S Kubik, MJ Bruzzone, D Challal, R Dreos… - Nature structural & …, 2019 - nature.com
Precise nucleosome organization at eukaryotic promoters is thought to be generated by
multiple chromatin remodeler (CR) enzymes and to affect transcription initiation. Using an …

Brahma links the SWI/SNF chromatin-remodeling complex with MeCP2-dependent transcriptional silencing

H KN, MZ Chow, EK Baker, S Pal, S Bassal… - Nature …, 2005 - nature.com
Transcriptional repression of methylated genes can be mediated by the methyl-CpG binding
protein MeCP2. Here we show that human Brahma (Brm), a catalytic component of the …

Chromatin remodeling: insights and intrigue from single-molecule studies

BR Cairns - Nature structural & molecular biology, 2007 - nature.com
Chromatin remodelers are ATP-hydrolyzing machines specialized to restructure, mobilize or
eject nucleosomes, allowing regulated exposure of DNA in chromatin. Recently, remodelers …

Single-molecule analysis and engineering of DNA motors

S Mohapatra, CT Lin, XA Feng, A Basu, T Ha - Chemical reviews, 2019 - ACS Publications
Molecular motors are diverse enzymes that transduce chemical energy into mechanical
work and, in doing so, perform critical cellular functions such as DNA replication and …

Biophysics of chromatin remodeling

IM Nodelman, GD Bowman - Annual review of biophysics, 2021 - annualreviews.org
As primary carriers of epigenetic information and gatekeepers of genomic DNA,
nucleosomes are essential for proper growth and development of all eukaryotic cells …

Mechanisms of ATP-dependent chromatin remodeling motors

CY Zhou, SL Johnson, NI Gamarra… - Annual review of …, 2016 - annualreviews.org
Chromatin remodeling motors play essential roles in all DNA-based processes. These
motors catalyze diverse outcomes ranging from sliding the smallest units of chromatin …