Recent advances in magnetic tweezers

I De Vlaminck, C Dekker - Annual review of biophysics, 2012 - annualreviews.org
Since their first demonstration of manipulation and mechanical coiling of a single DNA
molecule, magnetic tweezers have become a popular and widely used single-molecule …

Single-molecule experiments in biological physics: methods and applications

F Ritort - Journal of Physics: Condensed Matter, 2006 - iopscience.iop.org
I review single-molecule experiments (SMEs) in biological physics. Recent technological
developments have provided the tools to design and build scientific instruments of high …

Polymer Adhesion: Seeking New Solutions for an Old Problem#

G Raos, B Zappone - Macromolecules, 2021 - ACS Publications
Polymer adhesion is ubiquitous in both the natural world and human technology. It is also a
complex multiscale phenomenon, such that the solution of adhesion problems requires a …

Microrheology of complex fluids

TA Waigh - Reports on progress in physics, 2005 - iopscience.iop.org
The field of microrheology is concerned with how materials store and dissipate mechanical
energy as a function of length scale. Recent developments in the theory and instrumentation …

Magnetic torque tweezers: measuring torsional stiffness in DNA and RecA-DNA filaments

J Lipfert, JWJ Kerssemakers, T Jager, NH Dekker - Nature methods, 2010 - nature.com
We introduce magnetic torque tweezers, which enable direct single-molecule
measurements of torque. Our measurements of the effective torsional stiffness C of dsDNA …

Stochastic mechano-chemical kinetics of molecular motors: a multidisciplinary enterprise from a physicist's perspective

D Chowdhury - Physics Reports, 2013 - Elsevier
A molecular motor is made of either a single macromolecule or a macromolecular complex.
Just like their macroscopic counterparts, molecular motors “transduce” input energy into …

Dynamics of DNA supercoils

MTJ van Loenhout, MV De Grunt, C Dekker - Science, 2012 - science.org
DNA in cells exhibits a supercoiled state in which the double helix is additionally twisted to
form extended intertwined loops called plectonemes. Although supercoiling is vital to many …

Double-stranded RNA under force and torque: similarities to and striking differences from double-stranded DNA

J Lipfert, GM Skinner, JM Keegstra… - Proceedings of the …, 2014 - National Acad Sciences
RNA plays myriad roles in the transmission and regulation of genetic information that are
fundamentally constrained by its mechanical properties, including the elasticity and …

Frontiers in molecular dynamics simulations of DNA

A Pérez, FJ Luque, M Orozco - Accounts of chemical research, 2012 - ACS Publications
It has been known for decades that DNA is extremely flexible and polymorphic, but our
knowledge of its accessible conformational space remains limited. Structural data, primarily …

The physics of pulling polyproteins: a review of single molecule force spectroscopy using the AFM to study protein unfolding

ML Hughes, L Dougan - Reports on Progress in Physics, 2016 - iopscience.iop.org
One of the most exciting developments in the field of biological physics in recent years is the
ability to manipulate single molecules and probe their properties and function. Since its …