Classification of intrinsically disordered regions and proteins

R Van Der Lee, M Buljan, B Lang, RJ Weatheritt… - Chemical …, 2014 - ACS Publications
Over the past decade, we have observed a massive increase in the amount of information
describing protein sequences from a variety of organisms. 1, 2 While this may reflect the …

Effect of trehalose on protein structure

NK Jain, I Roy - Protein Science, 2009 - Wiley Online Library
Trehalose is a ubiquitous molecule that occurs in lower and higher life forms but not in
mammals. Till about 40 years ago, trehalose was visualized as a storage molecule, aiding …

Physics-driven coarse-grained model for biomolecular phase separation with near-quantitative accuracy

JA Joseph, A Reinhardt, A Aguirre, PY Chew… - Nature Computational …, 2021 - nature.com
Various physics-and data-driven sequence-dependent protein coarse-grained models have
been developed to study biomolecular phase separation and elucidate the dominant …

Revealing enzyme functional architecture via high-throughput microfluidic enzyme kinetics

CJ Markin, DA Mokhtari, F Sunden, MJ Appel, E Akiva… - Science, 2021 - science.org
INTRODUCTION Enzymes possess extraordinary catalytic proficiency and specificity. These
properties ultimately derive from interactions not just between the active-site residues and …

Intrinsically disordered sequences enable modulation of protein phase separation through distributed tyrosine motifs

Y Lin, SL Currie, MK Rosen - Journal of Biological Chemistry, 2017 - ASBMB
Liquid–liquid phase separation (LLPS) is thought to contribute to the establishment of many
biomolecular condensates, eukaryotic cell structures that concentrate diverse …

Advances in understanding stimulus-responsive phase behavior of intrinsically disordered protein polymers

KM Ruff, S Roberts, A Chilkoti, RV Pappu - Journal of molecular biology, 2018 - Elsevier
Proteins and synthetic polymers can undergo phase transitions in response to changes to
intensive solution parameters such as temperature, proton chemical potentials (pH), and …

Interactions of formulation excipients with proteins in solution and in the dried state

S Ohtake, Y Kita, T Arakawa - Advanced drug delivery reviews, 2011 - Elsevier
A variety of excipients are used to stabilize proteins, suppress protein aggregation, reduce
surface adsorption, or to simply provide physiological osmolality. The stabilizers encompass …

Chemistry of Hofmeister anions and osmolytes

Y Zhang, PS Cremer - Annual review of physical chemistry, 2010 - annualreviews.org
The study of the interactions of salts and osmolytes with macromolecules in aqueous
solution originated with experiments concerning protein precipitation more than 100 years …

Osmolyte effects on protein stability and solubility: A balancing act between backbone and side-chains

M Auton, J Rösgen, M Sinev, LMF Holthauzen… - Biophysical …, 2011 - Elsevier
In adaptation biology the discovery of intracellular osmolyte molecules that in some cases
reach molar levels, raises questions of how they influence protein thermodynamics. We've …

Industrial production of the cell protectant ectoine: protection mechanisms, processes, and products

HJ Kunte, G Lentzen, E Galinski - Current Biotechnology, 2014 - opus4.kobv.de
Bacteria, Archaea and Eukarya can adapt to Saline environments by accumulating
compatible solutes in order to maintain an osmotic equilibrium. Compatible solutes are of …