Next generation sequencing approaches to evaluate water and wastewater quality
The emergence of next generation sequencing (NGS) is revolutionizing the potential to
address complex microbiological challenges in the water industry. NGS technologies can …
address complex microbiological challenges in the water industry. NGS technologies can …
Bacterial community composition and structure in an Urban River impacted by different pollutant sources
Microbial communities in terrestrial fresh water are diverse and dynamic in composition due
to different environmental factors. The goal of this study was to undertake a comprehensive …
to different environmental factors. The goal of this study was to undertake a comprehensive …
[HTML][HTML] The NSERC Canadian Lake Pulse Network: A national assessment of lake health providing science for water management in a changing climate
Y Huot, CA Brown, G Potvin, D Antoniades… - Science of The Total …, 2019 - Elsevier
The distribution and quality of water resources vary dramatically across Canada, and human
impacts such as land-use and climate changes are exacerbating uncertainties in water …
impacts such as land-use and climate changes are exacerbating uncertainties in water …
Practical considerations for sampling and data analysis in contemporary metagenomics-based environmental studies
C Staley, MJ Sadowsky - Journal of microbiological methods, 2018 - Elsevier
Recent advancements in metagenomic-based studies, especially analyses of amplicon-
based DNA sequencing targeting taxonomic marker genes, has led to an unprecedented …
based DNA sequencing targeting taxonomic marker genes, has led to an unprecedented …
A community multi-omics approach towards the assessment of surface water quality in an urban river system
A multi-omics approach was applied to an urban river system (the Brisbane River (BR),
Queensland, Australia) in order to investigate surface water quality and characterize the …
Queensland, Australia) in order to investigate surface water quality and characterize the …
Metagenomic analysis of planktonic riverine microbial consortia using nanopore sequencing reveals insight into river microbe taxonomy and function
Background Riverine ecosystems are biogeochemical powerhouses driven largely by
microbial communities that inhabit water columns and sediments. Because rivers are used …
microbial communities that inhabit water columns and sediments. Because rivers are used …
Metagenomic profiling of microbial pathogens in the Little Bighorn River, Montana
The Little Bighorn River is the primary source of water for water treatment plants serving the
local Crow Agency population, and has special significance in the spiritual and ceremonial …
local Crow Agency population, and has special significance in the spiritual and ceremonial …
Aquatic bacterial communities associated with land use and environmental factors in agricultural landscapes using a metabarcoding approach
This study applied a 16S rRNA gene metabarcoding approach to characterize bacterial
community compositional and functional attributes for surface water samples collected …
community compositional and functional attributes for surface water samples collected …
Anthropogenic effects on bacterial diversity and function along a river‐to‐estuary gradient in Northwest Greece revealed by metagenomics
Studies assessing the effects of anthropogenic inputs on the taxonomic and functional
diversity of bacterioplankton communities in lotic ecosystems are limited. Here, we applied …
diversity of bacterioplankton communities in lotic ecosystems are limited. Here, we applied …
Metagenomics combined with comprehensive validation as a public health risk assessment tool for urban and agricultural run-off
Early detection of emerging and life-threatening pathogens circulating in complex
environments is urgently required to combat infectious diseases. This study proposed a …
environments is urgently required to combat infectious diseases. This study proposed a …