Systematic multi-omics integration (MOI) approach in plant systems biology

IN Jamil, J Remali, KA Azizan… - Frontiers in plant …, 2020 - frontiersin.org
Across all facets of biology, the rapid progress in high-throughput data generation has
enabled us to perform multi-omics systems biology research. Transcriptomics, proteomics …

Expanding omics resources for improvement of soybean seed composition traits

J Chaudhary, GB Patil, H Sonah… - Frontiers in Plant …, 2015 - frontiersin.org
Food resources of the modern world are strained due to the increasing population. There is
an urgent need for innovative methods and approaches to augment food production …

Metabolomic Profiling of Soybeans (Glycine max L.) Reveals the Importance of Sugar and Nitrogen Metabolism under Drought and Heat Stress

A Das, PJ Rushton, JS Rohila - Plants, 2017 - mdpi.com
Soybean is an important crop that is continually threatened by abiotic stresses, especially
drought and heat stress. At molecular levels, reduced yields due to drought and heat stress …

The metabolic roles of free amino acids during seed development

R Amir, G Galili, H Cohen - Plant Science, 2018 - Elsevier
Amino acids play vital roles in the central metabolism of seeds. They are primarily utilized for
the synthesis of seed-storage proteins, but also serve as precursors for the biosynthesis of …

QQS orphan gene regulates carbon and nitrogen partitioning across species via NF-YC interactions

L Li, W Zheng, Y Zhu, H Ye, B Tang… - Proceedings of the …, 2015 - National Acad Sciences
The allocation of carbon and nitrogen resources to the synthesis of plant proteins,
carbohydrates, and lipids is complex and under the control of many genes; much remains to …

Molecular characterization of the acquisition of longevity during seed maturation in soybean

JJ Pereira Lima, J Buitink, D Lalanne, RF Rossi… - PloS one, 2017 - journals.plos.org
Seed longevity, defined as the ability to remain alive during storage, is an important
agronomic factor. Poor longevity negatively impacts seedling establishment and …

Integrative analysis of metabolome and transcriptome reveals the improvements of seed quality in vegetable soybean (Glycine max (L.) Merr.)

Z Chen, W Zhong, Y Zhou, P Ji, Y Wan, S Shi, Z Yang… - Phytochemistry, 2022 - Elsevier
Vegetable soybean is derived from grain soybean. Seeds of vegetable soybean are bigger,
sweeter, and have smoother texture and better flavor than those of grain soybean. To better …

Suppression of SDP1 Improves Soybean Seed Composition by Increasing Oil and Reducing Undigestible Oligosaccharides

JA Aznar-Moreno, T Mukherjee, SA Morley… - Frontiers in Plant …, 2022 - frontiersin.org
In developing soybean seeds, carbon is partitioned between oil, protein and carbohydrates.
Here, we demonstrate that suppression of lipase-mediated turnover of triacylglycerols (TAG) …

Mass spectrometry in plant-omics

E Gemperline, C Keller, L Li - Analytical chemistry, 2016 - ACS Publications
Plant-omics is rapidly becoming an important field of study in the scientific community due to
the urgent need to address many of the most important questions facing humanity today with …

Integrative transcriptomics reveals association of abscisic acid and lignin pathways with cassava whitefly resistance

DG Nye, ML Irigoyen, L Perez-Fons… - BMC Plant …, 2023 - Springer
Background Whiteflies are a global threat to crop yields, including the African subsistence
crop cassava (Manihot esculenta). Outbreaks of superabundant whitefly populations …