Targeted protein degradation: A promise for undruggable proteins

KTG Samarasinghe, CM Crews - Cell chemical biology, 2021 - cell.com
Summary Protein homeostasis, or" proteostasis," is indispensable for a balanced, healthy
environment within the cell. However, when natural proteostasis mechanisms are …

Recent advances in understanding catalysis of protein folding by molecular chaperones

D Balchin, M Hayer‐Hartl, FU Hartl - FEBS letters, 2020 - Wiley Online Library
Molecular chaperones are highly conserved proteins that promote proper folding of other
proteins in vivo. Diverse chaperone systems assist de novo protein folding and trafficking …

Lm-gvp: an extensible sequence and structure informed deep learning framework for protein property prediction

Z Wang, SA Combs, R Brand, MR Calvo, P Xu… - Scientific reports, 2022 - nature.com
Proteins perform many essential functions in biological systems and can be successfully
developed as bio-therapeutics. It is invaluable to be able to predict their properties based on …

Biomolecular and biological applications of solid-state NMR with dynamic nuclear polarization enhancement

WY Chow, G De Paëpe, S Hediger - Chemical Reviews, 2022 - ACS Publications
Solid-state NMR spectroscopy (ssNMR) with magic-angle spinning (MAS) enables the
investigation of biological systems within their native context, such as lipid membranes, viral …

Cell-free gene expression: methods and applications

AC Hunt, BJ Rasor, K Seki, HM Ekas, KF Warfel… - Chemical …, 2024 - ACS Publications
Cell-free gene expression (CFE) systems empower synthetic biologists to build biological
molecules and processes outside of living intact cells. The foundational principle is that …

How does RNA fold dynamically?

DZ Bushhouse, EK Choi, LM Hertz, JB Lucks - Journal of molecular biology, 2022 - Elsevier
Recent advances in interrogating RNA folding dynamics have shown the classical model of
RNA folding to be incomplete. Here, we pose three prominent questions for the field that are …

Modulating co-translational protein folding by rational design and ribosome engineering

M Ahn, T Włodarski, A Mitropoulou, SHS Chan… - nature …, 2022 - nature.com
Co-translational folding is a fundamental process for the efficient biosynthesis of nascent
polypeptides that emerge through the ribosome exit tunnel. To understand how this process …

Control of mRNA fate by its encoded nascent polypeptide

M Höpfler, RS Hegde - Molecular Cell, 2023 - cell.com
Cells tightly regulate mRNA processing, localization, and stability to ensure accurate gene
expression in diverse cellular states and conditions. Most of these regulatory steps have …

The ribosome stabilizes partially folded intermediates of a nascent multi-domain protein

SHS Chan, T Włodarski, JO Streit, AME Cassaignau… - Nature …, 2022 - nature.com
Co-translational folding is crucial to ensure the production of biologically active proteins. The
ribosome can alter the folding pathways of nascent polypeptide chains, yet a structural …

Is protein folding a thermodynamically unfavorable, active, energy-dependent process?

I Sorokina, AR Mushegian, EV Koonin - International journal of molecular …, 2022 - mdpi.com
The prevailing current view of protein folding is the thermodynamic hypothesis, under which
the native folded conformation of a protein corresponds to the global minimum of Gibbs free …