A comprehensive survey on deep graph representation learning

W Ju, Z Fang, Y Gu, Z Liu, Q Long, Z Qiao, Y Qin… - Neural Networks, 2024 - Elsevier
Graph representation learning aims to effectively encode high-dimensional sparse graph-
structured data into low-dimensional dense vectors, which is a fundamental task that has …

Attending to graph transformers

L Müller, M Galkin, C Morris, L Rampášek - arXiv preprint arXiv …, 2023 - arxiv.org
Recently, transformer architectures for graphs emerged as an alternative to established
techniques for machine learning with graphs, such as (message-passing) graph neural …

Facilitating graph neural networks with random walk on simplicial complexes

C Zhou, X Wang, M Zhang - Advances in Neural …, 2024 - proceedings.neurips.cc
Node-level random walk has been widely used to improve Graph Neural Networks.
However, there is limited attention to random walk on edge and, more generally, on $ k …

Graph Artificial Intelligence in Medicine

R Johnson, MM Li, A Noori, O Queen… - Annual Review of …, 2024 - annualreviews.org
In clinical artificial intelligence (AI), graph representation learning, mainly through graph
neural networks and graph transformer architectures, stands out for its capability to capture …

Where did the gap go? reassessing the long-range graph benchmark

J Tönshoff, M Ritzert, E Rosenbluth… - arXiv preprint arXiv …, 2023 - arxiv.org
The recent Long-Range Graph Benchmark (LRGB, Dwivedi et al. 2022) introduced a set of
graph learning tasks strongly dependent on long-range interaction between vertices …

Graph ai in medicine

R Johnson, MM Li, A Noori, O Queen… - arXiv preprint arXiv …, 2023 - arxiv.org
In clinical artificial intelligence (AI), graph representation learning, mainly through graph
neural networks (GNNs), stands out for its capability to capture intricate relationships within …

Recurrent Distance Filtering for Graph Representation Learning

Y Ding, A Orvieto, B He, T Hofmann - Forty-first International …, 2024 - openreview.net
Graph neural networks based on iterative one-hop message passing have been shown to
struggle in harnessing the information from distant nodes effectively. Conversely, graph …

Cooperative graph neural networks

B Finkelshtein, X Huang, M Bronstein… - arXiv preprint arXiv …, 2023 - arxiv.org
Graph neural networks are popular architectures for graph machine learning, based on
iterative computation of node representations of an input graph through a series of invariant …

Polynormer: Polynomial-expressive graph transformer in linear time

C Deng, Z Yue, Z Zhang - arXiv preprint arXiv:2403.01232, 2024 - arxiv.org
Graph transformers (GTs) have emerged as a promising architecture that is theoretically
more expressive than message-passing graph neural networks (GNNs). However, typical …

On the Theoretical Expressive Power and the Design Space of Higher-Order Graph Transformers

C Zhou, R Yu, Y Wang - International Conference on …, 2024 - proceedings.mlr.press
Graph transformers have recently received significant attention in graph learning, partly due
to their ability to capture more global interaction via self-attention. Nevertheless, while higher …