Functional neuroimaging as a catalyst for integrated neuroscience

ES Finn, RA Poldrack, JM Shine - Nature, 2023 - nature.com
Functional magnetic resonance imaging (fMRI) enables non-invasive access to the awake,
behaving human brain. By tracking whole-brain signals across a diverse range of cognitive …

[HTML][HTML] Open and reproducible neuroimaging: From study inception to publication

G Niso, R Botvinik-Nezer, S Appelhoff, A De La Vega… - NeuroImage, 2022 - Elsevier
Empirical observations of how labs conduct research indicate that the adoption rate of open
practices for transparent, reproducible, and collaborative science remains in its infancy. This …

Hungry hungry hippos: Towards language modeling with state space models

DY Fu, T Dao, KK Saab, AW Thomas, A Rudra… - arXiv preprint arXiv …, 2022 - arxiv.org
State space models (SSMs) have demonstrated state-of-the-art sequence modeling
performance in some modalities, but underperform attention in language modeling …

[HTML][HTML] Organoid intelligence (OI): the new frontier in biocomputing and intelligence-in-a-dish

L Smirnova, BS Caffo, DH Gracias, Q Huang… - Frontiers in …, 2023 - frontiersin.org
Biological computing (or biocomputing) offers potential advantages over silicon-based
computing in terms of faster decision-making, continuous learning during tasks, and greater …

[HTML][HTML] Optical imaging and spectroscopy for the study of the human brain: status report

H Ayaz, WB Baker, G Blaney, DA Boas… - …, 2022 - spiedigitallibrary.org
This report is the second part of a comprehensive two-part series aimed at reviewing an
extensive and diverse toolkit of novel methods to explore brain health and function. While …

MRIQC: Advancing the automatic prediction of image quality in MRI from unseen sites

O Esteban, D Birman, M Schaer, OO Koyejo… - PloS one, 2017 - journals.plos.org
Quality control of MRI is essential for excluding problematic acquisitions and avoiding bias
in subsequent image processing and analysis. Visual inspection is subjective and …

THINGS-data, a multimodal collection of large-scale datasets for investigating object representations in human brain and behavior

MN Hebart, O Contier, L Teichmann, AH Rockter… - Elife, 2023 - elifesciences.org
Understanding object representations requires a broad, comprehensive sampling of the
objects in our visual world with dense measurements of brain activity and behavior. Here …

Charting brain growth and aging at high spatial precision

S Rutherford, C Fraza, R Dinga, SM Kia, T Wolfers… - elife, 2022 - elifesciences.org
Defining reference models for population variation, and the ability to study individual
deviations is essential for understanding inter-individual variability and its relation to the …

[HTML][HTML] The technology, opportunities and challenges of synthetic biological intelligence

BJ Kagan, C Gyngell, T Lysaght, VM Cole… - Biotechnology …, 2023 - Elsevier
Integrating neural cultures developed through synthetic biology methods with digital
computing has enabled the early development of Synthetic Biological Intelligence (SBI) …

A survey on deep learning in medical image registration: New technologies, uncertainty, evaluation metrics, and beyond

J Chen, Y Liu, S Wei, Z Bian, S Subramanian… - Medical Image …, 2024 - Elsevier
Deep learning technologies have dramatically reshaped the field of medical image
registration over the past decade. The initial developments, such as regression-based and U …