Path‐seq identifies an essential mycolate remodeling program for mycobacterial host adaptation

EJR Peterson, R Bailo, AC Rothchild… - Molecular systems …, 2019 - embopress.org
The success of Mycobacterium tuberculosis (MTB) stems from its ability to remain hidden
from the immune system within macrophages. Here, we report a new technology (Path‐seq) …

Simultaneous copy number alteration and single-nucleotide variation analysis in matched aqueous humor and tumor samples in children with retinoblastoma

MJ Schmidt, RK Prabakar, S Pike… - International Journal of …, 2023 - mdpi.com
Retinoblastoma (RB) is a childhood cancer that forms in the developing retina of young
children; this tumor cannot be biopsied due to the risk of provoking extraocular tumor …

Targeted sequencing of cytokine-induced PI3K-related genes in ulcerative colitis, colorectal cancer and colitis-associated cancer

NN Razali, RA Raja Ali… - International Journal of …, 2022 - mdpi.com
Chronic relapsing inflammatory bowel disease is strongly linked to an increased risk of
colitis-associated cancer (CAC). One of the well-known inflammatory carcinogenesis …

Systems and methods to detect rare mutations and copy number variation

AA Talasaz, SAW Mortimer - US Patent 11,447,813, 2022 - Google Patents
The present disclosure provides a system and method for the detection of rare mutations
and copy number variations in cell free polynucleotides. Generally, the systems and …

Systems and methods to detect rare mutations and copy number variation

AA Talasaz, SAW Mortimer - US Patent 11,434,523, 2022 - Google Patents
The present disclosure provides a system and method for the detection of rare mutations
and copy number variations in cell free polynucleotides. Generally, the systems and …

An essential mycolate remodeling program for mycobacterial adaptation in host cells

EJR Peterson, R Bailo, AC Rothchild, M Arrieta-Ortiz… - bioRxiv, 2018 - biorxiv.org
The success of Mycobacterium tuberculosis (MTB) stems from its ability to remain hidden
from the immune system within macrophages. Here, we report a new technology (Path-seq) …

Methods and systems for detecting genetic variants

AA Talasaz, H Eltoukhy, SAW Mortimer - US Patent 11,649,491, 2023 - Google Patents
Continuation of application No. 17/410.903, filed on Aug. 24, 2021, now Pat. No.
11,434,531, which is a continuation of application No. 17/167.974, filed on Feb. 4, 2021 …

Systems and methods to detect rare mutations and copy number variation

AA Talasaz, SAW Mortimer - US Patent 11,913,065, 2024 - Google Patents
The present disclosure provides a system and method for the detection of rare mutations
and copy number variations in cell free polynucleotides. Generally, the systems and …

Methods and systems for detecting genetic variants

AA Talasaz, H Eltoukhy, SAW Mortimer - US Patent 12,024,746, 2024 - Google Patents
Disclosed herein in are methods and systems for determining genetic variants (eg, copy
number variation) in a polynucleotide sample. A method for determining copy number …

Systems and methods to detect rare mutations and copy number variation

AA Talasaz, SAW Mortimer - US Patent 12,116,624, 2024 - Google Patents
The present disclosure provides a system and method for the detection of rare mutations
and copy number variations in cell free polynucleotides. Generally, the systems and …