Engineered autonomous dynamic regulation of metabolic flux
M Ream, KLJ Prather - Nature Reviews Bioengineering, 2024 - nature.com
Metabolic engineering is a powerful tool to reprogramme cells to produce value-added
chemicals. Such engineering strategies require the fine-tuning of a cell's metabolism to …
chemicals. Such engineering strategies require the fine-tuning of a cell's metabolism to …
Bacterial transcription factors bind to coding regions and regulate internal cryptic promoters
Transcription factors (TFs) regulate transcription by binding to the specific sequences at the
promoter region. However, the mechanisms and functions of TFs binding within the coding …
promoter region. However, the mechanisms and functions of TFs binding within the coding …
Characterization of an Entner–Doudoroff pathway-activated Escherichia coli
YE Kim, KH Cho, I Bang, CH Kim, YS Ryu… - … for Biofuels and …, 2022 - Springer
Background Escherichia coli have both the Embden–Meyerhof–Parnas pathway (EMPP)
and Entner–Doudoroff pathway (EDP) for glucose breakdown, while the EDP primarily …
and Entner–Doudoroff pathway (EDP) for glucose breakdown, while the EDP primarily …
Deep-learning optimized DEOCSU suite provides an iterable pipeline for accurate ChIP-exo peak calling
Recognizing binding sites of DNA-binding proteins is a key factor for elucidating
transcriptional regulation in organisms. ChIP-exo enables researchers to delineate genome …
transcriptional regulation in organisms. ChIP-exo enables researchers to delineate genome …
Model-driven experimental design workflow expands understanding of regulatory role of Nac in Escherichia coli
The establishment of experimental conditions for transcriptional regulator network (TRN)
reconstruction in bacteria continues to be impeded by the limited knowledge of activating …
reconstruction in bacteria continues to be impeded by the limited knowledge of activating …
[Retracted] Comprehensive and Integrated Analysis Identifies ZEB1 as a Key Novel Gene in Oral Squamous Cell Carcinoma
J Ma, Y Yao, D Tao, J Yin, L Chen, Y Cui… - Contrast Media & …, 2022 - Wiley Online Library
Oral squamous cell carcinoma (OSCC) is the most common head and neck cancer with a
poor prognosis. Therefore, it is crucial to explore molecular prognostic biomarkers for OSCC …
poor prognosis. Therefore, it is crucial to explore molecular prognostic biomarkers for OSCC …
Elucidating DNA-binding protein dynamics in Salmonella Typhimurium within macrophages using a breakthrough low-input ChIP-exo approach
Genome-wide identification of binding profiles for DNA-binding proteins in Salmonella
Typhimurium within macrophages is crucial for understanding virulence gene expression …
Typhimurium within macrophages is crucial for understanding virulence gene expression …