Ten years of transcriptomics in wild populations: what have we learned about their ecology and evolution?
Molecular ecology has moved beyond the use of a relatively small number of markers, often
noncoding, and it is now possible to use whole‐genome measures of gene expression with …
noncoding, and it is now possible to use whole‐genome measures of gene expression with …
Nonadditive gene expression in polyploids
Allopolyploidy involves hybridization and duplication of divergent parental genomes and
provides new avenues for gene expression. The expression levels of duplicated genes in …
provides new avenues for gene expression. The expression levels of duplicated genes in …
Polyploidy: pitfalls and paths to a paradigm
Investigators have long searched for a polyploidy paradigm—rules or principles that might
be common following polyploidization (whole‐genome duplication, WGD). Here we attempt …
be common following polyploidization (whole‐genome duplication, WGD). Here we attempt …
A molecular phylogeny and new subgeneric classification of Sporobolus (Poaceae: Chloridoideae: Sporobolinae)
The grass subtribe Sporobolinae contains six genera: Calamovilfa (5 spp. endemic to North
America), Crypsis (10 spp. endemic to Asia and Africa), Psilolemma (1 sp. endemic to …
America), Crypsis (10 spp. endemic to Asia and Africa), Psilolemma (1 sp. endemic to …
Gene Expression Variation Resolves Species and Individual Strains among Coral-Associated Dinoflagellates within the Genus Symbiodinium
Reef-building corals depend on symbiotic mutualisms with photosynthetic dinoflagellates in
the genus Symbiodinium. This large microalgal group comprises many highly divergent …
the genus Symbiodinium. This large microalgal group comprises many highly divergent …
The legacy of diploid progenitors in allopolyploid gene expression patterns
Allopolyploidization (hybridization and whole-genome duplication) is a common
phenomenon in plant evolution with immediate saltational effects on genome structure and …
phenomenon in plant evolution with immediate saltational effects on genome structure and …
Genome structures and halophyte-specific gene expression of the extremophile Thellungiella parvula in comparison with Thellungiella salsuginea (Thellungiella …
DH Oh, M Dassanayake, JS Haas… - Plant …, 2010 - academic.oup.com
The genome of Thellungiella parvula, a halophytic relative of Arabidopsis (Arabidopsis
thaliana), is being assembled using Roche-454 sequencing. Analyses of a 10-Mb scaffold …
thaliana), is being assembled using Roche-454 sequencing. Analyses of a 10-Mb scaffold …
Ecological epigenetics
Biologists have assumed that heritable variation due to DNA sequence differences (ie,
genetic variation) allows populations of organisms to be both robust and adaptable to …
genetic variation) allows populations of organisms to be both robust and adaptable to …
[HTML][HTML] Genome-wide transcriptomic responses of the seagrasses Zostera marina and Nanozostera noltii under a simulated heatwave confirm functional types
Genome-wide transcription analysis between related species occurring in overlapping
ranges can provide insights into the molecular basis underlying different ecological niches …
ranges can provide insights into the molecular basis underlying different ecological niches …
Next–generation sequencing and systematics: What can a billion base pairs of DNA sequence data do for you?
N Harrison, CA Kidner - Taxon, 2011 - Wiley Online Library
The increasing speed and decreasing cost of generating DNA sequence data has
transformed experimental approaches in many fields of biology. In this review we describe …
transformed experimental approaches in many fields of biology. In this review we describe …