MRtrix3: A fast, flexible and open software framework for medical image processing and visualisation

JD Tournier, R Smith, D Raffelt, R Tabbara… - Neuroimage, 2019 - Elsevier
MRtrix3 is an open-source, cross-platform software package for medical image processing,
analysis and visualisation, with a particular emphasis on the investigation of the brain using …

[HTML][HTML] Quantitative mapping of the brain's structural connectivity using diffusion MRI tractography: A review

F Zhang, A Daducci, Y He, S Schiavi, C Seguin… - Neuroimage, 2022 - Elsevier
Diffusion magnetic resonance imaging (dMRI) tractography is an advanced imaging
technique that enables in vivo reconstruction of the brain's white matter connections at …

A massive 7T fMRI dataset to bridge cognitive neuroscience and artificial intelligence

EJ Allen, G St-Yves, Y Wu, JL Breedlove… - Nature …, 2022 - nature.com
Extensive sampling of neural activity during rich cognitive phenomena is critical for robust
understanding of brain function. Here we present the Natural Scenes Dataset (NSD), in …

Diffusion MRI fiber tractography of the brain

B Jeurissen, M Descoteaux, S Mori… - NMR in …, 2019 - Wiley Online Library
The ability of fiber tractography to delineate non‐invasively the white matter fiber pathways
of the brain raises possibilities for clinical applications and offers enormous potential for …

QSIPrep: an integrative platform for preprocessing and reconstructing diffusion MRI data

M Cieslak, PA Cook, X He, FC Yeh, T Dhollander… - Nature …, 2021 - nature.com
Diffusion-weighted magnetic resonance imaging (dMRI) is the primary method for
noninvasively studying the organization of white matter in the human brain. Here we …

Heritability and interindividual variability of regional structure-function coupling

Z Gu, KW Jamison, MR Sabuncu… - Nature Communications, 2021 - nature.com
White matter structural connections are likely to support flow of functional activation or
functional connectivity. While the relationship between structural and functional connectivity …

The ENIGMA Toolbox: multiscale neural contextualization of multisite neuroimaging datasets

S Larivière, C Paquola, B Park, J Royer, Y Wang… - Nature …, 2021 - nature.com
Through harmonized procedures and by sharing site-specific brain metrics (for example,
cortical thickness) or aggregated statistical maps, ENIGMA has set the stage for large-scale …

Multi-tissue constrained spherical deconvolution for improved analysis of multi-shell diffusion MRI data

B Jeurissen, JD Tournier, T Dhollander, A Connelly… - NeuroImage, 2014 - Elsevier
Constrained spherical deconvolution (CSD) has become one of the most widely used
methods to extract white matter (WM) fibre orientation information from diffusion-weighted …

Tractography dissection variability: What happens when 42 groups dissect 14 white matter bundles on the same dataset?

KG Schilling, F Rheault, L Petit, CB Hansen, V Nath… - Neuroimage, 2021 - Elsevier
White matter bundle segmentation using diffusion MRI fiber tractography has become the
method of choice to identify white matter fiber pathways in vivo in human brains. However …

SIFT2: Enabling dense quantitative assessment of brain white matter connectivity using streamlines tractography

RE Smith, JD Tournier, F Calamante, A Connelly - Neuroimage, 2015 - Elsevier
Diffusion MRI streamlines tractography allows for the investigation of the brain white matter
pathways non-invasively. However a fundamental limitation of this technology is its non …