[HTML][HTML] LayNii: A software suite for layer-fMRI

LR Huber, BA Poser, PA Bandettini, K Arora, K Wagstyl… - NeuroImage, 2021 - Elsevier
High-resolution fMRI in the sub-millimeter regime allows researchers to resolve brain activity
across cortical layers and columns non-invasively. While these high-resolution data make it …

Mapping the human subcortical auditory system using histology, postmortem MRI and in vivo MRI at 7T

KR Sitek, OF Gulban, E Calabrese, GA Johnson… - elife, 2019 - elifesciences.org
Studying the human subcortical auditory system non-invasively is challenging due to its
small, densely packed structures deep within the brain. Additionally, the elaborate three …

Evolution of neocortical folding: A phylogenetic comparative analysis of MRI from 34 primate species

K Heuer, OF Gulban, PL Bazin, A Osoianu… - Cortex, 2019 - Elsevier
We conducted a comparative analysis of primate cerebral size and neocortical folding using
magnetic resonance imaging data from 65 individuals belonging to 34 different species. We …

[HTML][HTML] Systematic cortical thickness and curvature patterns in primates

N Demirci, ME Hoffman, MA Holland - NeuroImage, 2023 - Elsevier
Humans are known to have significant and consistent differences in thickness throughout
the cortex, with thick outer gyral folds and thin inner sulcal folds. Our previous work has …

The impact of correction on MP2RAGE cortical T1 and apparent cortical thickness at 7T

RAM Haast, D Ivanov, K Uludağ - Human brain mapping, 2018 - Wiley Online Library
Determination of cortical thickness using MRI has often been criticized due to the presence
of various error sources. Specifically, anatomical MRI relying on T1 contrast may be …

The risk of bias in denoising methods: Examples from neuroimaging

K Kay - PLoS One, 2022 - journals.plos.org
Experimental datasets are growing rapidly in size, scope, and detail, but the value of these
datasets is limited by unwanted measurement noise. It is therefore tempting to apply …

High-resolution motion-corrected 7.0-T MRI to derive morphologic measures from the human cerebellum in vivo

N Priovoulos, M Andersen, SO Dumoulin, VO Boer… - Radiology, 2023 - pubs.rsna.org
Background The human cerebellum has a large, highly folded cortical sheet. Its visualization
is important for various disorders, including multiple sclerosis and spinocerebellar ataxias …

[HTML][HTML] Effects of MP2RAGE B1+ sensitivity on inter-site T1 reproducibility and hippocampal morphometry at 7T

RAM Haast, JC Lau, D Ivanov, RS Menon, K Uludağ… - Neuroimage, 2021 - Elsevier
Most neuroanatomical studies are based on T 1-weighted MR images, whose intensity
profiles are not solely determined by the tissue's longitudinal relaxation times (T 1), but also …

A lifespan-generalizable skull-stripping model for magnetic resonance images that leverages prior knowledge from brain atlases

L Wang, Y Sun, J Seidlitz, RAI Bethlehem… - Nature Biomedical …, 2025 - nature.com
In magnetic resonance imaging of the brain, an imaging-preprocessing step removes the
skull and other non-brain tissue from the images. But methods for such a skull-stripping …

CEREBRUM‐7T: fast and fully volumetric brain segmentation of 7 Tesla MR volumes

M Svanera, S Benini, D Bontempi… - Human brain …, 2021 - Wiley Online Library
Ultra‐high‐field magnetic resonance imaging (MRI) enables sub‐millimetre resolution
imaging of the human brain, allowing the study of functional circuits of cortical layers at the …