Cellular barcoding tracks heterogeneous clones through selective pressures and phenotypic transitions

KK Howland, A Brock - Trends in Cancer, 2023 - cell.com
Genomic DNA barcoding has emerged as a sensitive and flexible tool to measure the fates
of clonal subpopulations within a heterogeneous cancer cell population. Coupling cellular …

Dynamical hallmarks of cancer: phenotypic switching in melanoma and epithelial-mesenchymal plasticity

P Jain, M Pillai, AS Duddu, JA Somarelli… - Seminars in Cancer …, 2023 - Elsevier
Phenotypic plasticity was recently incorporated as a hallmark of cancer. This plasticity can
manifest along many interconnected axes, such as stemness and differentiation, drug …

Evolution of phenotypic plasticity leads to tumor heterogeneity with implications for therapy

S Syga, HP Jain, M Krellner, H Hatzikirou… - PLOS Computational …, 2024 - journals.plos.org
Cancer is a significant global health issue, with treatment challenges arising from intratumor
heterogeneity. This heterogeneity stems mainly from somatic evolution, causing genetic …

A mathematical framework for comparison of intermittent versus continuous adaptive chemotherapy dosing in cancer

C McGehee, Y Mori - npj Systems Biology and Applications, 2024 - nature.com
Chemotherapy resistance in cancer remains a barrier to curative therapy in advanced
disease. Dosing of chemotherapy is often chosen based on the maximum tolerated dosing …

A Nexus between Genetic and Non-Genetic Mechanisms Guides KRAS Inhibitor Resistance in Lung Cancer

P Kulkarni, A Mohanty, S Ramisetty, H Duvivier, A Khan… - Biomolecules, 2023 - mdpi.com
Several studies in the last few years have determined that, in contrast to the prevailing
dogma that drug resistance is simply due to Darwinian evolution—the selection of mutant …

The impact of tumor associated macrophages on tumor biology under the lens of mathematical modelling: A review

P Shojaee, F Mornata, A Deutsch, M Locati… - Frontiers in …, 2022 - frontiersin.org
In this article, we review the role of mathematical modelling to elucidate the impact of tumor-
associated macrophages (TAMs) in tumor progression and therapy design. We first outline …

Association analysis of hepatocellular carcinoma‐related hub proteins and hub genes

X Zhang, B Zhang, Y Zhang… - PROTEOMICS–Clinical …, 2023 - Wiley Online Library
Purpose Hepatocellular carcinoma (HCC) is one of the most common cancers worldwide.
The occurrence and development of HCC are closely related to epigenetic modifications …

[HTML][HTML] Theoretical understanding of evolutionary dosing following tumor dynamics

MA Masud, E Kim - Chaos, Solitons & Fractals, 2024 - Elsevier
Recent preclinical and clinical studies have suggested that evolution-based cancer
therapies exploiting intratumor competition can significantly delay resistance. Various …

A deep learning-based method for predicting the emerging degree of research topics using emerging index

Z Yang, W Zhang, Z Wang, X Huang - Scientometrics, 2024 - Springer
With the exponential growth of the volume of scientific literature, it is particularly important to
grasp the research frontier. Predicting emerging research topics will help research …

Investigating phenotypic plasticity due to toxicants with exposure disparities in primary human breast cells in vitro

J Schroeder, KM Polemi, A Tapaswi… - Frontiers in …, 2024 - pmc.ncbi.nlm.nih.gov
Introduction Breast cancer is the second most diagnosed cancer, as well as the primary
cause of cancer death in women worldwide. Of the different breast cancer subtypes, triple …