Spatial Profiling Reveals Equivalence-Derived Molecular Signatures of Brain Mimicry and Adaptation in Breast Cancer Brain Metastases

M Umeh Garcia, CY Yeh, B Godfrey, P Nunez Perez… - bioRxiv, 2025 - biorxiv.org
Brain metastases (BrMets), common for advanced-stage breast cancer patients, are
associated with poor median survival and accompanied by severe neurologic decline …

Systematic Benchmarking of High-Throughput Subcellular Spatial Transcriptomics Platforms

P Ren, R Zhang, Y Wang, P Zhang, C Luo, S Wang… - bioRxiv, 2024 - biorxiv.org
Recent advancements in spatial transcriptomics technologies have significantly enhanced
resolution and throughput, underscoring an urgent need for systematic benchmarking. To …

Spatial Transcriptomic Profiling Of Advanced Ovarian Clear Cell Carcinoma Reveals Intra-Tumor Heterogeneity In Epithelial-Mesenchymal Gradient

T Truong Le, D Yi-Te Wang, KC Chen, SRG Yan… - bioRxiv, 2024 - biorxiv.org
Intratumoral heterogeneity is intrinsically comprised of molecular alterations of tumor cells
and extrinsically from interconnections with microenvironments. This study explores the …

Echidna: A Bayesian framework for quantifying gene dosage effect impacting phenotypic plasticity

JL Fan, M Zhang, WG O'Brien, JD Myers, JC Melms… - bioRxiv, 2024 - biorxiv.org
Phenotypic plasticity, the ability of cells to adapt their behavior in response to genetic or
environmental changes, is a fundamental biological process that drives cellular diversity in …

Tumor-derived exosomal miR-205 promotes ovarian cancer cell progression through M2 macrophage polarization via PI3K/Akt/mTOR pathway

L He, Q Chen, X Wu - 2024 - researchsquare.com
Background Tumour-associated macrophages (TAMs) are the most abundant immune cells
in the tumour environment and are considered to be similar to M2 macrophages, which …