[HTML][HTML] Prediction of repurposed drugs for Coronaviruses using artificial intelligence and machine learning

A Rajput, A Thakur, A Mukhopadhyay, S Kamboj… - Computational and …, 2021 - Elsevier
The world is facing the COVID-19 pandemic caused by Severe Acute Respiratory Syndrome
Coronavirus 2 (SARS-CoV-2). Likewise, other viruses of the Coronaviridae family were …

Anti-biofilm: Machine learning assisted prediction of IC50 activity of chemicals against biofilms of microbes causing antimicrobial resistance and implications in drug …

A Rajput, KT Bhamare, A Thakur, M Kumar - Journal of Molecular Biology, 2023 - Elsevier
Biofilms are one of the leading causes of antibiotic resistance. It acts as a physical barrier
against the human immune system and drugs. The use of anti-biofilm agents helps in …

Computational identification of potential multitarget inhibitors of Nipah virus by molecular docking and molecular dynamics

V Randhawa, S Pathania, M Kumar - Microorganisms, 2022 - mdpi.com
Nipah virus (NiV) is a recently emerged paramyxovirus that causes severe encephalitis and
respiratory diseases in humans. Despite the severe pathogenicity of this virus and its …

Multiple machine learning comparisons of HIV cell-based and reverse transcriptase data sets

KM Zorn, TR Lane, DP Russo, AM Clark… - Molecular …, 2019 - ACS Publications
The human immunodeficiency virus (HIV) causes over a million deaths every year and has a
huge economic impact in many countries. The first class of drugs approved were nucleoside …

Application of deep learning and molecular modeling to identify small drug-like compounds as potential HIV-1 entry inhibitors

AM Andrianov, GI Nikolaev, NA Shuldov… - Journal of …, 2022 - Taylor & Francis
A generative adversarial autoencoder for the rational design of potential HIV-1 entry
inhibitors able to block CD4-binding site of the viral envelope protein gp120 was developed …

Discovery of novel HIV protease inhibitors using modern computational techniques

SN Okafor, P Angsantikul, H Ahmed - International Journal of Molecular …, 2022 - mdpi.com
The human immunodeficiency virus type 1 (HIV-1) has continued to be a global concern.
With the new HIV incidence, the emergence of multi-drug resistance and the untoward side …

A comprehensive comparison of molecular feature representations for use in predictive modeling

T Stepišnik, B Škrlj, J Wicker, D Kocev - Computers in Biology and Medicine, 2021 - Elsevier
Abstract Machine learning methods are commonly used for predicting molecular properties
to accelerate material and drug design. An important part of this process is deciding how to …

Small molecules of natural origin as potential anti-HIV agents: a computational approach

L Crisan, A Bora - Life, 2021 - mdpi.com
The human immunodeficiency virus type 1 (HIV-1), one of the leading causes of infectious
death globally, generates severe damages to people's immune systems and makes them …

[HTML][HTML] Targeting non-structural proteins of Hepatitis C virus for predicting repurposed drugs using QSAR and machine learning approaches

S Kamboj, A Rajput, A Rastogi, A Thakur… - Computational and …, 2022 - Elsevier
Hepatitis C virus (HCV) infection causes viral hepatitis leading to hepatocellular carcinoma.
Despite the clinical use of direct-acting antivirals (DAAs) still there is treatment failure in 5 …

LigTMap: ligand and structure-based target identification and activity prediction for small molecular compounds

F Shaikh, HK Tai, N Desai, SWI Siu - Journal of Cheminformatics, 2021 - Springer
Target prediction is a crucial step in modern drug discovery. However, existing experimental
approaches to target prediction are time-consuming and costly. Here, we introduce …