Big data in conservation genomics: Boosting skills, hedging bets, and staying current in the field

RM Schweizer, N Saarman, KM Ramstad… - Journal of …, 2021 - academic.oup.com
A current challenge in the fields of evolutionary, ecological, and conservation genomics is
balancing production of large-scale datasets with additional training often required to handle …

Fast sequence-based microsatellite genotyping development workflow

O Lepais, E Chancerel, C Boury, F Salin, A Manicki… - PeerJ, 2020 - peerj.com
Application of high-throughput sequencing technologies to microsatellite genotyping
(SSRseq) has been shown to remove many of the limitations of electrophoresis-based …

Incorporating evolutionary based tools in cephalopod fisheries management

I Sabolić, M Baltazar-Soares, A Štambuk - Reviews in fish biology and …, 2021 - Springer
With gradual decline of global finfish resources, fisheries targeting cephalopods expanded.
Yet, the stock assessment and management practice are frequently lacking, and existing …

Effects of stocking at the parr stage on the reproductive fitness and genetic diversity of a wild population of Atlantic salmon (Salmo salar L.)

R Bouchard, K Wellband, L Lecomte… - Evolutionary …, 2022 - Wiley Online Library
Captive‐breeding programs are among the most adopted conservation practices to mitigate
the loss of biodiversity, including genetic diversity. However, both genetic and nongenetic …

Behavioural variation among divergent European and North American farmed and wild Atlantic salmon (Salmo salar) populations

SS Islam, BF Wringe, IR Bradbury, IA Fleming - Applied Animal Behaviour …, 2020 - Elsevier
Animals often display consistent differences in behaviours across situations and contexts.
However, little is known about how behavioural traits might vary in a context-dependent …

NGS-μsat: bioinformatics framework supporting high throughput microsatellite genotyping from next generation sequencing platforms

D Roy, SJ Lehnert, CJ Venney, R Walter… - Conservation Genetics …, 2021 - Springer
Although genetic techniques are moving toward collecting massive amounts of genome-
wide data through genome-scans, microsatellite markers (µsats) still provide a simple and …

Development of a massively parallel, genotyping-by-sequencing assay in American badger (Taxidea taxus) highlights the need for careful validation when working …

ME Donaldson, K Jackson, Y Rico, JB Sayers… - Conservation Genetics …, 2020 - Springer
Non-invasive DNA sampling to identify and enumerate species is critical to population
monitoring and for developing effective management strategies. However, individual DNA …

Efficient genotyping with backwards compatibility: converting a legacy microsatellite panel for muskellunge (Esox masquinongy) to genotyping-by-sequencing …

KM Gruenthal, WA Larson - Conservation Genetics Resources, 2021 - Springer
Microsatellites have been a staple of population genetics research for over three decades,
and many large datasets have been generated with these markers. Microsatellites have …

Genetic Diversity and Structure of Chinese Chum Salmon (Oncorhynchus keta) Between Wild and Hatchery Populations Based on SSR Markers

Y Han, L Li, Z Ge, X Li, H Liu, W Chen, P Liu, L Fan… - 2023 - researchsquare.com
The study was aimed at analyzing the genetic diversity and genetic structure of released
populations and wild populations of chum salmon (Oncorhynchus keta) in the Tumen River …

Assessing sociality: catarrhine microsatellites and the dynamics of glucocorticoids with social relationships in wild male Assamese macaques (Macaca assamensis)

J Stranks - 2024 - ediss.uni-goettingen.de
In order to navigate within-group competition and maximise fitness, strategies have evolved
in group-living animals, including social dominance ranks and affiliative relationships. Both …