Advances and prospects for the Human BioMolecular Atlas Program (HuBMAP)

S Jain, L Pei, JM Spraggins, M Angelo, JP Carson… - Nature cell …, 2023 - nature.com
Abstract The Human BioMolecular Atlas Program (HuBMAP) aims to create a multi-scale
spatial atlas of the healthy human body at single-cell resolution by applying advanced …

Anatomical structures, cell types and biomarkers of the Human Reference Atlas

K Börner, SA Teichmann, EM Quardokus, JC Gee… - Nature cell …, 2021 - nature.com
Abstract The Human Reference Atlas (HRA) aims to map all of the cells of the human body
to advance biomedical research and clinical practice. This Perspective presents …

[图书][B] Building ontologies with basic formal ontology

R Arp, B Smith, AD Spear - 2015 - books.google.com
An introduction to the field of applied ontology with examples derived particularly from
biomedicine, covering theoretical components, design practices, and practical applications …

A telerehabilitation system for the selection, evaluation and remote management of therapies

D Anton, I Berges, J Bermúdez, A Goñi, A Illarramendi - Sensors, 2018 - mdpi.com
Telerehabilitation systems that support physical therapy sessions anywhere can help save
healthcare costs while also improving the quality of life of the users that need rehabilitation …

[PDF][PDF] Primer on ontologies

J Hastings - The gene ontology handbook, 2017 - library.oapen.org
As molecular biology has increasingly become a data-intensive discipline, ontologies have
emerged as an essential computational tool to assist in the organisation, description and …

MetamORF: a repository of unique short open reading frames identified by both experimental and computational approaches for gene and metagene analyses

SA Choteau, A Wagner, P Pierre, L Spinelli, C Brun - Database, 2021 - academic.oup.com
The development of high-throughput technologies revealed the existence of non-canonical
short open reading frames (sORFs) on most eukaryotic ribonucleic acids. They are …

METAGENOTE: a simplified web platform for metadata annotation of genomic samples and streamlined submission to NCBI's sequence read archive

M Quiñones, DT Liou, C Shyu, W Kim… - BMC …, 2020 - Springer
Background The improvements in genomics methods coupled with readily accessible high-
throughput sequencing have contributed to our understanding of microbial species …

Specimen, biological structure, and spatial ontologies in support of a Human Reference Atlas

BW Herr, J Hardi, EM Quardokus, A Bueckle, L Chen… - Scientific Data, 2023 - nature.com
Abstract The Human Reference Atlas (HRA) is defined as a comprehensive, three-
dimensional (3D) atlas of all the cells in the healthy human body. It is compiled by an …

Tissue registration and exploration user interfaces in support of a human reference atlas

K Börner, A Bueckle, BW Herr, LE Cross… - Communications …, 2022 - nature.com
Seventeen international consortia are collaborating on a human reference atlas (HRA), a
comprehensive, high-resolution, three-dimensional atlas of all the cells in the healthy human …

Supporting digital healthcare services using semantic web technologies

G Barisevičius, M Coste, D Geleta, D Juric… - The Semantic Web …, 2018 - Springer
We report on our efforts and faced challenges in using Semantic Web technologies for the
purposes of supporting healthcare services provided by Babylon Health. First, we created a …