[HTML][HTML] Genome regulation by polycomb and trithorax: 70 years and counting

B Schuettengruber, HM Bourbon, L Di Croce, G Cavalli - Cell, 2017 - cell.com
Polycomb (PcG) and Trithorax (TrxG) group proteins are evolutionarily conserved chromatin-
modifying factors originally identified as part of an epigenetic cellular memory system that …

Mechanisms of Polycomb group protein function in cancer

V Parreno, AM Martinez, G Cavalli - Cell research, 2022 - nature.com
Cancer arises from a multitude of disorders resulting in loss of differentiation and a stem cell-
like phenotype characterized by uncontrolled growth. Polycomb Group (PcG) proteins are …

Epigenetic balance of gene expression by Polycomb and COMPASS families

A Piunti, A Shilatifard - Science, 2016 - science.org
BACKGROUND Multicellular organisms depend on the precise orchestration of gene
expression to direct embryonic development and to maintain tissue homeostasis through …

Three-dimensional genome architecture: players and mechanisms

A Pombo, N Dillon - Nature reviews Molecular cell biology, 2015 - nature.com
The different cell types of an organism share the same DNA, but during cell differentiation
their genomes undergo diverse structural and organizational changes that affect gene …

Structure and function of long noncoding RNAs in epigenetic regulation

TR Mercer, JS Mattick - Nature structural & molecular biology, 2013 - nature.com
Genomes of complex organisms encode an abundance and diversity of long noncoding
RNAs (lncRNAs) that are expressed throughout the cell and fulfill a wide variety of regulatory …

[HTML][HTML] Three-dimensional folding and functional organization principles of the Drosophila genome

T Sexton, E Yaffe, E Kenigsberg, F Bantignies… - Cell, 2012 - cell.com
Chromosomes are the physical realization of genetic information and thus form the basis for
its readout and propagation. Here we present a high-resolution chromosomal contact map …

Multiplex chromatin interactions with single-molecule precision

M Zheng, SZ Tian, D Capurso, M Kim, R Maurya, B Lee… - Nature, 2019 - nature.com
The genomes of multicellular organisms are extensively folded into 3D chromosome
territories within the nucleus. Advanced 3D genome-mapping methods that combine …

Enhancer loops appear stable during development and are associated with paused polymerase

Y Ghavi-Helm, FA Klein, T Pakozdi, L Ciglar… - Nature, 2014 - nature.com
Developmental enhancers initiate transcription and are fundamental to our understanding of
developmental networks, evolution and disease. Despite their importance, the properties …

The hierarchy of the 3D genome

JH Gibcus, J Dekker - Molecular cell, 2013 - cell.com
Mammalian genomes encode genetic information in their linear sequence, but appropriate
expression of their genes requires chromosomes to fold into complex three-dimensional …

The role of chromosome domains in shaping the functional genome

T Sexton, G Cavalli - Cell, 2015 - cell.com
The genome must be highly compacted to fit within eukaryotic nuclei but must be accessible
to the transcriptional machinery to allow appropriate expression of genes in different cell …