[HTML][HTML] Advances and trends in omics technology development

X Dai, L Shen - Frontiers in Medicine, 2022 - frontiersin.org
The human history has witnessed the rapid development of technologies such as high-
throughput sequencing and mass spectrometry that led to the concept of 'omics' and …

Potential resistance of SARS-CoV-2 main protease (Mpro) against protease inhibitors: lessons learned from HIV-1 protease

JA Mótyán, M Mahdi, G Hoffka, J Tőzsér - International journal of …, 2022 - mdpi.com
Coronavirus disease 2019 (COVID-19), caused by the severe acute respiratory syndrome 2
(SARS-CoV-2), has been one of the most devastating pandemics of recent times. The lack of …

Search and sequence analysis tools services from EMBL-EBI in 2022

F Madeira, M Pearce, ARN Tivey… - Nucleic acids …, 2022 - academic.oup.com
The EMBL-EBI search and sequence analysis tools frameworks provide integrated access to
EMBL-EBI's data resources and core bioinformatics analytical tools. EBI Search …

Structure and mutations of SARS-CoV-2 spike protein: a focused overview

R Mehra, KP Kepp - ACS Infectious Diseases, 2021 - ACS Publications
The spike protein (S-protein) of SARS-CoV-2, the protein that enables the virus to infect
human cells, is the basis for many vaccines and a hotspot of concerning virus evolution …

COVID19db: a comprehensive database platform to discover potential drugs and targets of COVID-19 at whole transcriptomic scale

W Zhang, Y Zhang, Z Min, J Mo, Z Ju… - Nucleic acids …, 2022 - academic.oup.com
Many open access transcriptomic data of coronavirus disease 2019 (COVID-19) were
generated, they have great heterogeneity and are difficult to analyze. To utilize these …

SARS‐CoV‐2 structural coverage map reveals viral protein assembly, mimicry, and hijacking mechanisms

SI O'Donoghue, A Schafferhans, N Sikta… - Molecular systems …, 2021 - embopress.org
We modeled 3D structures of all SARS‐CoV‐2 proteins, generating 2,060 models that span
69% of the viral proteome and provide details not available elsewhere. We found that˜ 6% of …

[HTML][HTML] Applying the digital data and the bioinformatics tools in SARS-CoV-2 research

M Tan, J Xia, H Luo, G Meng, Z Zhu - Computational and Structural …, 2023 - Elsevier
Bioinformatics has been playing a crucial role in the scientific progress to fight against the
pandemic of the coronavirus disease 2019 (COVID-19) caused by the severe acute …

[HTML][HTML] Predicted structural mimicry of spike receptor-binding motifs from highly pathogenic human coronaviruses

CA Beaudoin, AR Jamasb, AF Alsulami… - Computational and …, 2021 - Elsevier
Viruses often encode proteins that mimic host proteins in order to facilitate infection. Little
work has been done to understand the potential mimicry of the SARS-CoV-2, SARS-CoV …

Structures of the SARS-CoV-2 spike glycoprotein and applications for novel drug development

XH Liu, T Cheng, BY Liu, J Chi, T Shu… - Frontiers in …, 2022 - frontiersin.org
COVID-19 caused by SARS-CoV-2 has raised a health crisis worldwide. The high morbidity
and mortality associated with COVID-19 and the lack of effective drugs or vaccines for SARS …

Next-generation bioinformatics approaches and resources for coronavirus vaccine discovery and development—A perspective review

R Chatterjee, M Ghosh, S Sahoo, S Padhi, N Misra… - Vaccines, 2021 - mdpi.com
COVID-19 is a contagious disease caused by severe acute respiratory syndrome
coronavirus 2 (SARS-CoV-2). To fight this pandemic, which has caused a massive death toll …