A hitchhiker's guide to diffusion tensor imaging

JM Soares, P Marques, V Alves, N Sousa - Frontiers in neuroscience, 2013 - frontiersin.org
Diffusion Tensor Imaging (DTI) studies are increasingly popular among clinicians and
researchers as they provide unique insights into brain network connectivity. However, in …

A computational framework for ultra-high resolution cortical segmentation at 7 Tesla

PL Bazin, M Weiss, J Dinse, A Schäfer, R Trampel… - NeuroImage, 2014 - Elsevier
This paper presents a computational framework for whole brain segmentation of 7 Tesla
magnetic resonance images able to handle ultra-high resolution data. The approach …

Self-reported sleep and β-amyloid deposition in community-dwelling older adults

AP Spira, AA Gamaldo, Y An, MN Wu… - JAMA …, 2013 - jamanetwork.com
Importance Older adults commonly report disturbed sleep, and recent studies in humans
and animals suggest links between sleep and Alzheimer disease biomarkers. Studies are …

PANDA: a pipeline toolbox for analyzing brain diffusion images

Z Cui, S Zhong, P Xu, Y He, G Gong - Frontiers in human …, 2013 - frontiersin.org
Diffusion magnetic resonance imaging (dMRI) is widely used in both scientific research and
clinical practice in in-vivo studies of the human brain. While a number of post-processing …

Evaluating white matter lesion segmentations with refined Sørensen-Dice analysis

A Carass, S Roy, A Gherman, JC Reinhold, A Jesson… - Scientific reports, 2020 - nature.com
The Sørensen-Dice index (SDI) is a widely used measure for evaluating medical image
segmentation algorithms. It offers a standardized measure of segmentation accuracy which …

[HTML][HTML] Statistical normalization techniques for magnetic resonance imaging

RT Shinohara, EM Sweeney, J Goldsmith, N Shiee… - NeuroImage: Clinical, 2014 - Elsevier
While computed tomography and other imaging techniques are measured in absolute units
with physical meaning, magnetic resonance images are expressed in arbitrary units that are …

A systematic relationship between functional connectivity and intracortical myelin in the human cerebral cortex

JM Huntenburg, PL Bazin, A Goulas, CL Tardif… - Cerebral …, 2017 - academic.oup.com
Research in the macaque monkey suggests that cortical areas with similar microstructure
are more likely to be connected. Here, we examine this link in the human cerebral cortex …

Longitudinal multiple sclerosis lesion segmentation: resource and challenge

A Carass, S Roy, A Jog, JL Cuzzocreo, E Magrath… - NeuroImage, 2017 - Elsevier
In conjunction with the ISBI 2015 conference, we organized a longitudinal lesion
segmentation challenge providing training and test data to registered participants. The …

Anatomically motivated modeling of cortical laminae

MD Waehnert, J Dinse, M Weiss, MN Streicher… - Neuroimage, 2014 - Elsevier
Improvements in the spatial resolution of structural and functional MRI are beginning to
enable analysis of intracortical structures such as heavily myelinated layers in 3D, a …

DTIPrep: quality control of diffusion-weighted images

I Oguz, M Farzinfar, J Matsui, F Budin, Z Liu… - Frontiers in …, 2014 - frontiersin.org
In the last decade, diffusion MRI (dMRI) studies of the human and animal brain have been
used to investigate a multitude of pathologies and drug-related effects in neuroscience …