Metagenomic approaches unearth methanotroph phylogenetic and metabolic diversity

GJ Smith, KC Wrighton - Current Issues in Molecular Biology, 2019 - mdpi.com
Methanotrophic microorganisms utilize methane as an electron donor and a carbon source.
To date, the capacity to oxidize methane is restricted to microorganisms from three bacterial …

Expanded phylogenetic diversity and metabolic flexibility of mercury-methylating microorganisms

EA McDaniel, BD Peterson, SLR Stevens, PQ Tran… - …, 2020 - Am Soc Microbiol
Methylmercury is a potent bioaccumulating neurotoxin that is produced by specific
microorganisms that methylate inorganic mercury. Methylmercury production in diverse …

Long-read-resolved, ecosystem-wide exploration of nucleotide and structural microdiversity of lake bacterioplankton genomes

Y Okazaki, S Nakano, A Toyoda, H Tamaki - Msystems, 2022 - Am Soc Microbiol
Reconstruction of metagenome-assembled genomes (MAGs) has become a fundamental
approach in microbial ecology. However, a MAG is hardly complete and overlooks genomic …

Comparative study on gut microbiota in three Anura frogs from a mountain stream

Z Chen, JQ Chen, Y Liu, J Zhang… - Ecology and …, 2022 - Wiley Online Library
Composition and diversity in gut microbiota are impacted by a wide variety of factors. The
similarity of gut microbiota in related or sympatric species has been gaining recent traction …

Genome-Resolved Metagenomics Extends the Environmental Distribution of the Verrucomicrobia Phylum to the Deep Terrestrial Subsurface

SL Nixon, RA Daly, MA Borton, LM Solden, SA Welch… - Msphere, 2019 - Am Soc Microbiol
Bacteria of the phylum Verrucomicrobia are prevalent and are particularly common in soil
and freshwater environments. Their cosmopolitan distribution and reported capacity for …

Competitive exclusion and metabolic dependency among microorganisms structure the cellulose economy of an agricultural soil

RC Wilhelm, C Pepe-Ranney, P Weisenhorn, M Lipton… - MBio, 2021 - Am Soc Microbiol
Microorganisms that degrade cellulose utilize extracellular reactions that yield free by-
products which can promote interactions with noncellulolytic organisms. We hypothesized …

[HTML][HTML] Authigenic formation of Ca–Mg carbonates in the shallow alkaline Lake Neusiedl, Austria

D Fussmann, AJE von Hoyningen-Huene… - …, 2020 - bg.copernicus.org
Despite advances regarding the microbial and organic-molecular impact on nucleation, the
formation of dolomite in sedimentary environments is still incompletely understood. Since …

Environmental predictors of electroactive bacterioplankton in small boreal lakes

CN Olmsted, R Ort, PQ Tran… - Environmental …, 2023 - Wiley Online Library
Extracellular electron transfer (EET) by electroactive bacteria in anoxic soils and sediments
is an intensively researched subject, but EET's function in planktonic ecology has been less …

[PDF][PDF] Genome-resolved community structure and function of freshwater bacteria at a Continental scale

RE Garner, SA Kraemer, VE Onana, Y Huot, DA Walsh - BioRxiv, 2022 - researchgate.net
Lakes are highly heterogenous ecosystems inhabited by a rich microbiome whose genomic
diversity remains poorly defined compared to other major biomes. Here, we present a …

Metagenomics analysis of therapeutical peats samples mined from the deposits of the “Puścizna Wielka” peat bog in Poland

M Łukasz, B Marta, M Mazańska, T Szynal, S Jolanta - 2023 - researchsquare.com
Therapeutic values of therapeutical peats have been appreciated for centuries. Although
microbiological criteria for therapeutical peats used in therapies exists in Poland, this source …