Metabolomics: a primer

X Liu, JW Locasale - Trends in biochemical sciences, 2017 - cell.com
Metabolomics generates a profile of small molecules that are derived from cellular
metabolism and can directly reflect the outcome of complex networks of biochemical …

Histone methylation dynamics and gene regulation occur through the sensing of one-carbon metabolism

SJ Mentch, M Mehrmohamadi, L Huang, X Liu, D Gupta… - Cell metabolism, 2015 - cell.com
Summary S-adenosylmethionine (SAM) and S-adenosylhomocysteine (SAH) link one-
carbon metabolism to methylation status. However, it is unknown whether regulation of SAM …

Towards quantitative mass spectrometry-based metabolomics in microbial and mammalian systems

RV Kapoore, S Vaidyanathan - … Transactions of the …, 2016 - royalsocietypublishing.org
Metabolome analyses are a suite of analytical approaches that enable us to capture
changes in the metabolome (small molecular weight components, typically less than 1500 …

Aldolase B-mediated fructose metabolism drives metabolic reprogramming of colon cancer liver metastasis

P Bu, KY Chen, K Xiang, C Johnson, SB Crown… - Cell metabolism, 2018 - cell.com
Cancer metastasis accounts for the majority of cancer-related deaths and remains a clinical
challenge. Metastatic cancer cells generally resemble cells of the primary cancer, but they …

Paracrine Wnt5a-β-catenin signaling triggers a metabolic program that drives dendritic cell tolerization

F Zhao, C Xiao, KS Evans, T Theivanthiran, N DeVito… - Immunity, 2018 - cell.com
Despite recent advances, many cancers remain refractory to available immunotherapeutic
strategies. Emerging evidence indicates that the tolerization of local dendritic cells (DCs) …

A predictive model for selective targeting of the Warburg effect through GAPDH inhibition with a natural product

MV Liberti, Z Dai, SE Wardell, JA Baccile, X Liu, X Gao… - Cell metabolism, 2017 - cell.com
Targeted cancer therapies that use genetics are successful, but principles for selectively
targeting tumor metabolism that is also dependent on the environment remain unknown. We …

p300-mediated lysine 2-hydroxyisobutyrylation regulates glycolysis

H Huang, S Tang, M Ji, Z Tang, M Shimada, X Liu, S Qi… - Molecular cell, 2018 - cell.com
Summary Lysine 2-hydroxyisobutyrylation (Khib) is an evolutionarily conserved and
widespread histone mark like lysine acetylation (Kac). Here we report that p300 functions as …

Liver-type glutaminase GLS2 is a druggable metabolic node in luminal-subtype breast cancer

MJ Lukey, AA Cluntun, WP Katt, JL Miao-chong… - Cell reports, 2019 - cell.com
Efforts to target glutamine metabolism for cancer therapy have focused on the glutaminase
isozyme GLS. The importance of the other isozyme, GLS2, in cancer has remained unclear …

The rate of glycolysis quantitatively mediates specific histone acetylation sites

AA Cluntun, H Huang, L Dai, X Liu, Y Zhao… - Cancer & …, 2015 - Springer
Background Glucose metabolism links metabolic status to protein acetylation. However, it
remains poorly understood to what extent do features of glucose metabolism contribute to …

SUCLA2 mutations cause global protein succinylation contributing to the pathomechanism of a hereditary mitochondrial disease

P Gut, S Matilainen, JG Meyer, P Pällijeff… - Nature …, 2020 - nature.com
Mitochondrial acyl-coenzyme A species are emerging as important sources of protein
modification and damage. Succinyl-CoA ligase (SCL) deficiency causes a mitochondrial …