Identification of tumor antigens with immunopeptidomics

C Chong, G Coukos, M Bassani-Sternberg - Nature biotechnology, 2022 - nature.com
The identification of actionable tumor antigens is indispensable for the development of
several cancer immunotherapies, including T cell receptor–transduced T cells and patient …

Analysis of major histocompatibility complex (MHC) immunopeptidomes using mass spectrometry

E Caron, DJ Kowalewski, CC Koh, T Sturm… - Molecular & Cellular …, 2015 - ASBMB
The myriad of peptides presented at the cell surface by class I and class II major
histocompatibility complex (MHC) molecules are referred to as the immunopeptidome and …

TCR contact residue hydrophobicity is a hallmark of immunogenic CD8+ T cell epitopes

D Chowell, S Krishna, PD Becker… - Proceedings of the …, 2015 - National Acad Sciences
Despite the availability of major histocompatibility complex (MHC)-binding peptide
prediction algorithms, the development of T-cell vaccines against pathogen and tumor …

Large-scale interlaboratory study to develop, analytically validate and apply highly multiplexed, quantitative peptide assays to measure cancer-relevant proteins in …

SE Abbatiello, B Schilling, DR Mani… - Molecular & Cellular …, 2015 - ASBMB
There is an increasing need in biology and clinical medicine to robustly and reliably
measure tens to hundreds of peptides and proteins in clinical and biological samples with …

Mass spectrometry-based antigen discovery for cancer immunotherapy

M Bassani-Sternberg, G Coukos - Current opinion in immunology, 2016 - Elsevier
Highlights•Immunopeptidomics analysis reveals the in vivo antigenic repertoire of
tumors.•Shared cancer antigens and private neo-epitopes are detected by …

Multiplexed relative and absolute quantitative immunopeptidomics reveals MHC I repertoire alterations induced by CDK4/6 inhibition

LE Stopfer, JM Mesfin, BA Joughin… - Nature …, 2020 - nature.com
Peptides bound to class I major histocompatibility complexes (MHC) play a critical role in
immune cell recognition and can trigger an antitumor immune response in cancer. Surface …

Kinetics of antigen expression and epitope presentation during virus infection

NP Croft, SA Smith, YC Wong, CT Tan… - PLoS …, 2013 - journals.plos.org
Current knowledge about the dynamics of antigen presentation to T cells during viral
infection is very poor despite being of fundamental importance to our understanding of anti …

Revisiting the arthritogenic peptide theory: quantitative not qualitative changes in the peptide repertoire of HLA–B27 allotypes

RB Schittenhelm, TCCLK Sian… - Arthritis & …, 2015 - Wiley Online Library
Objective The association of HLA–B27 with spondyloarthropathy is one of the strongest
documented for any autoimmune disease. A common hypothesis for this association is the …

The human leukocyte antigen–presented ligandome of B lymphocytes

C Hassan, MGD Kester, AH de Ru, P Hombrink… - Molecular & Cellular …, 2013 - ASBMB
Peptides presented by human leukocyte antigen (HLA) molecules on the cell surface play a
crucial role in adaptive immunology, mediating the communication between T cells and …

[HTML][HTML] Identification of tumor antigens among the HLA peptidomes of glioblastoma tumors and plasma

B Shraibman, E Barnea, DM Kadosh… - Molecular & Cellular …, 2019 - Elsevier
Glioblastoma multiforme (GBM) is the most aggressive brain tumor with poor prognosis to
most patients. Immunotherapy of GBM is a potentially beneficial treatment option, whose …