Netextractor: extracting a cerebellar tissue gene regulatory network using differentially expressed high mutual information binary RNA profiles

B Husain, AR Hickman, Y Hang… - G3: Genes …, 2020 - academic.oup.com
Bigenic expression relationships are conventionally defined based on metrics such as
Pearson or Spearman correlation that cannot typically detect latent, non-linear …

EdgeCrafting: mining embedded, latent, nonlinear patterns to construct gene relationship networks

B Husain, M Reed Bender, F Alex Feltus - G3, 2022 - academic.oup.com
The mechanisms that coordinate cellular gene expression are highly complex and intricately
interconnected. Thus, it is necessary to move beyond a fully reductionist approach to …