Revisiting the impact of inversions in evolution: from population genetic markers to drivers of adaptive shifts and speciation?

AA Hoffmann, LH Rieseberg - Annual review of ecology …, 2008 - annualreviews.org
There is a growing appreciation that chromosome inversions affect rates of adaptation,
speciation, and the evolution of sex chromosomes. Comparative genomic studies have …

Phylogeny of the Genus Drosophila

PM O'Grady, R DeSalle - Genetics, 2018 - academic.oup.com
Understanding phylogenetic relationships among taxa is key to designing and implementing
comparative analyses. The genus Drosophila, which contains over 1600 species, is one of …

Deeply conserved synteny resolves early events in vertebrate evolution

O Simakov, F Marlétaz, JX Yue, B O'Connell… - Nature ecology & …, 2020 - nature.com
Although it is widely believed that early vertebrate evolution was shaped by ancient whole-
genome duplications, the number, timing and mechanism of these events remain elusive …

[HTML][HTML] Evolution of genes and genomes on the Drosophila phylogeny

AG Clark, MB Eisen, DR Smith, CM Bergman, B Oliver… - Nature, 2007 - hal.science
Comparative analysis of multiple genomes in a phylogenetic framework dramatically
improves the precision and sensitivity of evolutionary inference, producing more robust …

How and why chromosome inversions evolve

M Kirkpatrick - PLoS biology, 2010 - journals.plos.org
How and Why Chromosome Inversions Evolve | PLOS Biology Skip to main content
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The Arabidopsis lyrata genome sequence and the basis of rapid genome size change

TT Hu, P Pattyn, EG Bakker, J Cao, JF Cheng… - Nature …, 2011 - nature.com
We report the 207-Mb genome sequence of the North American Arabidopsis lyrata strain
MN47 based on 8.3× dideoxy sequence coverage. We predict 32,670 genes in this …

How chromosomal inversions reorient the evolutionary process

EL Berdan, NH Barton, R Butlin… - Journal of …, 2023 - Wiley Online Library
Inversions are structural mutations that reverse the sequence of a chromosome segment
and reduce the effective rate of recombination in the heterozygous state. They play a major …

Predicting thermal adaptation by looking into populations' genomic past

AJ Cortés, F López-Hernández… - Frontiers in …, 2020 - frontiersin.org
Molecular evolution offers an insightful theory to interpret the genomic consequences of
thermal adaptation to previous events of climate change beyond range shifts. However …

Inversion breakpoints and the evolution of supergenes

R Villoutreix, D Ayala, M Joron, Z Gompert… - Molecular …, 2021 - Wiley Online Library
The coexistence of discrete morphs that differ in multiple traits is common within natural
populations of many taxa. Such morphs are often associated with chromosomal inversions …

Whole-genome sequencing of Oryza brachyantha reveals mechanisms underlying Oryza genome evolution

J Chen, Q Huang, D Gao, J Wang, Y Lang, T Liu… - Nature …, 2013 - nature.com
The wild species of the genus Oryza contain a largely untapped reservoir of agronomically
important genes for rice improvement. Here we report the 261-Mb de novo assembled …