A review on SNP and other types of molecular markers and their use in animal genetics

A Vignal, D Milan, M SanCristobal… - Genetics selection …, 2002 - gse-journal.org
During the last ten years, the use of molecular markers, revealing polymorphism at the DNA
level, has been playing an increasing part in animal genetics studies. Amongst others, the …

Characterization and conservation of genetic diversity in subdivided populations

MA Toro, A Caballero - … of the Royal Society B: Biological …, 2005 - royalsocietypublishing.org
We review the available tools for analysing genetic diversity in conservation programmes of
subdivided populations. Ways for establishing conservation priorities have been developed …

Genetic diversity and population structure assessed by SSR and SNP markers in a large germplasm collection of grape

F Emanuelli, S Lorenzi, L Grzeskowiak, V Catalano… - BMC plant biology, 2013 - Springer
Background The economic importance of grapevine has driven significant efforts in
genomics to accelerate the exploitation of Vitis resources for development of new cultivars …

Population structure and genetic diversity in a commercial maize breeding program assessed with SSR and SNP markers

D Van Inghelandt, AE Melchinger, C Lebreton… - Theoretical and Applied …, 2010 - Springer
Abstract Information about the genetic diversity and population structure in elite breeding
material is of fundamental importance for the improvement of crops. The objectives of our …

Detecting selection in population trees: the Lewontin and Krakauer test extended

M Bonhomme, C Chevalet, B Servin, S Boitard… - Genetics, 2010 - academic.oup.com
Detecting genetic signatures of selection is of great interest for many research issues.
Common approaches to separate selective from neutral processes focus on the variance of …

Molecular characterization of global maize breeding germplasm based on genome-wide single nucleotide polymorphisms

Y Lu, J Yan, CT Guimaraes, S Taba, Z Hao… - Theoretical and applied …, 2009 - Springer
Abstract Characterization of genetic diversity is of great value to assist breeders in parental
line selection and breeding system design. We screened 770 maize inbred lines with 1,034 …

Empirical comparison of simple sequence repeats and single nucleotide polymorphisms in assessment of maize diversity and relatedness

MT Hamblin, ML Warburton, ES Buckler - PloS one, 2007 - journals.plos.org
While Simple Sequence Repeats (SSRs) are extremely useful genetic markers, recent
advances in technology have produced a shift toward use of single nucleotide …

Geographical partitioning of goat diversity in Europe and the Middle East

J Cañón, D García, MA García‐Atance… - Animal …, 2006 - Wiley Online Library
Thirty microsatellite markers were analysed in 1426 goats from 45 traditional or rare breeds
in 15 European and Middle Eastern countries. In all populations inbreeding was indicated …

Population structure, genetic diversity and linkage disequilibrium in elite winter wheat assessed with SNP and SSR markers

T Würschum, SM Langer, CFH Longin… - Theoretical and Applied …, 2013 - Springer
Modern genomics approaches rely on the availability of high-throughput and high-density
genotyping platforms. A major breakthrough in wheat genotyping was the development of an …

Molecular characterization of breeds and its use in conservation

MA Toro, J Fernández, A Caballero - Livestock Science, 2009 - Elsevier
The conservation of farm animal resources is important for coping with future breeding
needs and for facilitating the sustainable use of marginal areas. The increasing availability …