Information retrieval and text mining technologies for chemistry

M Krallinger, O Rabal, A Lourenco, J Oyarzabal… - Chemical …, 2017 - ACS Publications
Efficient access to chemical information contained in scientific literature, patents, technical
reports, or the web is a pressing need shared by researchers and patent attorneys from …

[HTML][HTML] Biomedical text mining and its applications in cancer research

F Zhu, P Patumcharoenpol, C Zhang, Y Yang… - Journal of biomedical …, 2013 - Elsevier
Cancer is a malignant disease that has caused millions of human deaths. Its study has a
long history of well over 100years. There have been an enormous number of publications on …

ScispaCy: fast and robust models for biomedical natural language processing

M Neumann, D King, I Beltagy, W Ammar - arXiv preprint arXiv …, 2019 - arxiv.org
Despite recent advances in natural language processing, many statistical models for
processing text perform extremely poorly under domain shift. Processing biomedical and …

Part-of-speech tagging from 97% to 100%: is it time for some linguistics?

CD Manning - International conference on intelligent text processing …, 2011 - Springer
I examine what would be necessary to move part-of-speech tagging performance from its
current level of about 97.3% token accuracy (56% sentence accuracy) to close to 100 …

[图书][B] Handbook of natural language processing

N Indurkhya, FJ Damerau - 2010 - taylorfrancis.com
The Handbook of Natural Language Processing, Second Edition presents practical tools
and techniques for implementing natural language processing in computer systems. Along …

[PDF][PDF] Posterior regularization for structured latent variable models

K Ganchev, J Graça, J Gillenwater, B Taskar - The Journal of Machine …, 2010 - jmlr.org
We present posterior regularization, a probabilistic framework for structured, weakly
supervised learning. Our framework efficiently incorporates indirect supervision via …

Search-based structured prediction

H Daumé, J Langford, D Marcu - Machine learning, 2009 - Springer
We present Searn, an algorithm for integrating sear ch and l earn ing to solve complex
structured prediction problems such as those that occur in natural language, speech …

Overview of BioCreative II gene mention recognition

L Smith, LK Tanabe, RJ Ando, CJ Kuo, IF Chung… - Genome biology, 2008 - Springer
Nineteen teams presented results for the Gene Mention Task at the BioCreative II Workshop.
In this task participants designed systems to identify substrings in sentences corresponding …

Natural language processing for EHR-based pharmacovigilance: a structured review

Y Luo, WK Thompson, TM Herr, Z Zeng, MA Berendsen… - Drug safety, 2017 - Springer
The goal of pharmacovigilance is to detect, monitor, characterize and prevent adverse drug
events (ADEs) with pharmaceutical products. This article is a comprehensive structured …

[HTML][HTML] Recurrent neural networks for classifying relations in clinical notes

Y Luo - Journal of biomedical informatics, 2017 - Elsevier
We proposed the first models based on recurrent neural networks (more specifically Long
Short-Term Memory-LSTM) for classifying relations from clinical notes. We tested our models …