The value of reference genomes in the conservation of threatened species

P Brandies, E Peel, CJ Hogg, K Belov - Genes, 2019 - mdpi.com
Conservation initiatives are now more crucial than ever—over a million plant and animal
species are at risk of extinction over the coming decades. The genetic management of …

The peril of gene-targeted conservation

M Kardos, ABA Shafer - Trends in ecology & evolution, 2018 - cell.com
The genomics revolution has sparked interest in using our increased understanding of the
loci involved in phenotypic variation and adaptation to advance the conservation of …

A comparison of pedigree, genetic and genomic estimates of relatedness for informing pairing decisions in two critically endangered birds: Implications for …

SJ Galla, R Moraga, L Brown, S Cleland… - Evolutionary …, 2020 - Wiley Online Library
Conservation management strategies for many highly threatened species include
conservation breeding to prevent extinction and enhance recovery. Pairing decisions for …

Offspring survival changes over generations of captive breeding

KA Farquharson, CJ Hogg, CE Grueber - Nature Communications, 2021 - nature.com
Conservation breeding programs such as zoos play a major role in preventing extinction, but
their sustainability may be impeded by neutral and adaptive population genetic change …

From reference genomes to population genomics: comparing three reference-aligned reduced-representation sequencing pipelines in two wildlife species

B Wright, KA Farquharson, EA McLennan, K Belov… - BMC genomics, 2019 - Springer
Background Recent advances in genomics have greatly increased research opportunities
for non-model species. For wildlife, a growing availability of reference genomes means that …

A demonstration of conservation genomics for threatened species management

BR Wright, KA Farquharson… - Molecular Ecology …, 2020 - Wiley Online Library
As species extinction rates increase, genomics provides a powerful tool to support intensive
management of threatened species. We use the Tasmanian devil (Sarcophilus harrisii) to …

[PDF][PDF] Australia state of the environment 2016: biodiversity, independent report to the Australian Government Minister for the Environment and Energy

ID Cresswell, HT Murphy - Australian Government Department of …, 2017 - researchgate.net
Executive summary The value of Australia's biodiversity is difficult to measure, but
biodiversity is a key part of Australia's national identity, and is integral to subsistence and …

Founder relationships and conservation management: empirical kinships reveal the effect on breeding programmes when founders are assumed to be unrelated

CJ Hogg, B Wright, KM Morris, AV Lee… - Animal …, 2019 - Wiley Online Library
Conservation breeding programmes have become widespread as natural habitats shrink,
and have been historically managed using pedigree data and an assumption that …

Conserving adaptive potential: lessons from Tasmanian devils and their transmissible cancer

PA Hohenlohe, HI McCallum, ME Jones… - Conservation …, 2019 - Springer
Maintenance of adaptive genetic variation has long been a goal of management of natural
populations, but only recently have genomic tools allowed identification of specific loci …

Conservation implications of limited genetic diversity and population structure in Tasmanian devils (Sarcophilus harrisii)

S Hendricks, B Epstein, B Schönfeld, C Wiench… - Conservation …, 2017 - Springer
Tasmanian devils face a combination of threats to persistence, including devil facial tumor
disease (DFTD), an epidemic transmissible cancer. We used RAD sequencing to investigate …