Culturing the human microbiota and culturomics

JC Lagier, G Dubourg, M Million, F Cadoret… - Nature Reviews …, 2018 - nature.com
The gut microbiota has an important role in the maintenance of human health and in disease
pathogenesis. This importance was realized through the advent of omics technologies and …

The rebirth of culture in microbiology through the example of culturomics to study human gut microbiota

JC Lagier, P Hugon, S Khelaifia… - Clinical microbiology …, 2015 - Am Soc Microbiol
Bacterial culture was the first method used to describe the human microbiota, but this
method is considered outdated by many researchers. Metagenomics studies have since …

Current and past strategies for bacterial culture in clinical microbiology

JC Lagier, S Edouard, I Pagnier… - Clinical microbiology …, 2015 - Am Soc Microbiol
SUMMARY A pure bacterial culture remains essential for the study of its virulence, its
antibiotic susceptibility, and its genome sequence in order to facilitate the understanding …

Genomics of Actinobacteria: Tracing the Evolutionary History of an Ancient Phylum

M Ventura, C Canchaya, A Tauch… - Microbiology and …, 2007 - Am Soc Microbiol
Actinobacteria constitute one of the largest phyla among Bacteria and represent gram-
positive bacteria with a high G+ C content in their DNA. This bacterial group includes …

Infective endocarditis in adults

E Mylonakis, SB Calderwood - New England Journal of Medicine, 2001 - Mass Medical Soc
The clinical features of this complex infection have changed in the past several decades. It is
now an infection of older people, and mitral-valve prolapse is the most common …

[HTML][HTML] Emerging infectious diseases in Africa in the 21st century

F Fenollar, O Mediannikov - New microbes and new infections, 2018 - Elsevier
Many infectious diseases have emerged or reemerged in Africa in the 21st century. Some of
them are associated with newly discovered microorganisms such as Rickettsia felis and …

The contribution of culturomics to the repertoire of isolated human bacterial and archaeal species

M Bilen, JC Dufour, JC Lagier, F Cadoret, Z Daoud… - Microbiome, 2018 - Springer
After a decade of research and metagenomic analyses, our knowledge of the human
microbiota appears to have reached a plateau despite promising results. In many studies …

Modern clinical microbiology: new challenges and solutions

PE Fournier, M Drancourt, P Colson… - Nature Reviews …, 2013 - nature.com
In the twenty-first century, the clinical microbiology laboratory plays a central part in
optimizing the management of infectious diseases and surveying local and global …

The microbe, the infection enigma, and the host

JL Casanova, L Abel - Annual Review of Microbiology, 2024 - annualreviews.org
Human infectious diseases are unique in that the discovery of their environmental trigger,
the microbe, was sufficient to drive the development of extraordinarily effective principles …

Endocarditis due to rare and fastidious bacteria

P Brouqui, D Raoult - Clinical microbiology reviews, 2001 - Am Soc Microbiol
The etiologic diagnosis of infective endocarditis is easily made in the presence of
continuous bacteremia with gram-positive cocci. However, the blood culture may contain a …