Inferring the historical patterns of biological evolution

M Pagel - Nature, 1999 - nature.com
Phylogenetic trees describe the pattern of descent amongst a group of species. With the
rapid accumulation of DNA sequence data, more and more phylogenies are being …

Getting the measure of biodiversity

A Purvis, A Hector - Nature, 2000 - nature.com
The term 'biodiversity'is a simple contraction of 'biological diversity', and at first sight the
concept is simple too: biodiversity is the sum total of all biotic variation from the level of …

Phylogenomics reveals rapid, simultaneous diversification of three major clades of Gondwanan frogs at the Cretaceous–Paleogene boundary

YJ Feng, DC Blackburn, D Liang… - Proceedings of the …, 2017 - National Acad Sciences
Frogs (Anura) are one of the most diverse groups of vertebrates and comprise nearly 90% of
living amphibian species. Their worldwide distribution and diverse biology make them well …

Relaxed phylogenetics and dating with confidence

AJ Drummond, SYW Ho, MJ Phillips, A Rambaut - PLoS biology, 2006 - journals.plos.org
In phylogenetics, the unrooted model of phylogeny and the strict molecular clock model are
two extremes of a continuum. Despite their dominance in phylogenetic inference, it is …

Conservatism of ecological niches in evolutionary time

AT Peterson, J Soberón, V Sánchez-Cordero - Science, 1999 - science.org
Theory predicts low niche differentiation between species over evolutionary time scales, but
little empirical evidence is available. Reciprocal geographic predictions based on ecological …

Estimating absolute rates of molecular evolution and divergence times: a penalized likelihood approach

MJ Sanderson - Molecular biology and evolution, 2002 - academic.oup.com
Rates of molecular evolution vary widely between lineages, but quantification of how rates
change has proven difficult. Recently proposed estimation procedures have mainly adopted …

A molecular timescale for vertebrate evolution

S Kumar, SB Hedges - Nature, 1998 - nature.com
A timescale is necessary for estimating rates of molecular and morphological change in
organisms and for interpreting patterns of macroevolution and biogeography …

[图书][B] Computational molecular evolution

Z Yang - 2006 - books.google.com
The field of molecular evolution has experienced explosive growth in recent years due to the
rapid accumulation of genetic sequence data, continuous improvements to computer …

[HTML][HTML] Constraints on the timescale of animal evolutionary history

MJ Benton, PCJ Donoghue, RJ Asher, M Friedman… - 2015 - palaeo-electronica.org
Dating the tree of life is a core endeavor in evolutionary biology. Rates of evolution are
fundamental to nearly every evolutionary model and process. Rates need dates. There is …

Accounting for calibration uncertainty in phylogenetic estimation of evolutionary divergence times

SYW Ho, MJ Phillips - Systematic biology, 2009 - academic.oup.com
The estimation of phylogenetic divergence times from sequence data is an important
component of many molecular evolutionary studies. There is now a general appreciation …