Pmechdb: A public database of elementary polar reaction steps

M Tavakoli, RJ Miller, MC Angel… - Journal of Chemical …, 2024 - ACS Publications
Most online chemical reaction databases are not publicly accessible or are fully
downloadable. These databases tend to contain reactions in noncanonicalized formats and …

Reproducing Reaction Mechanisms with Machine‐Learning Models Trained on a Large‐Scale Mechanistic Dataset

JF Joung, MH Fong, J Roh, Z Tu… - Angewandte Chemie …, 2024 - Wiley Online Library
Mechanistic understanding of organic reactions can facilitate reaction development, impurity
prediction, and in principle, reaction discovery. While several machine learning models have …

Unraveling the Molecular Magic: AI Insights on the Formation of Extraordinarily Stretchable Hydrogels

SH Emmami, AP Meibody, L Tayebi, M Tavakoli… - arXiv preprint arXiv …, 2024 - arxiv.org
The deliberate manipulation of ammonium persulfate, methylenebisacrylamide,
dimethyleacrylamide, and polyethylene oxide concentrations resulted in the development of …

[PDF][PDF] Finding Reaction Mechanism Pathways with Deep Reinforcement Learning and Heuristic Search

R Panta, M Tavakoli, C Geils… - … on Bridging the …, 2023 - prl-theworkshop.github.io
Artificial intelligence (AI) has been used to predict the outcomes of chemical reactions.
However, most of these reaction predictors are designed to predict the major outcome of …

[PDF][PDF] ReactAIvate: A Deep Learning Approach to Predicting Reaction Mechanisms and Unmasking Reactivity

A Hoquea, M Dasa, M Baranwalb, RB Sunoja - 2024 - sc.iitb.ac.in
A chemical reaction mechanism (CRM) is a sequence of molecular-level events involving
bond-breaking/forming processes, generating transient intermediates along the reaction …

PMechRP: Interpretable Deep Learning for Polar Reaction Prediction

RJ Miller, B Rudisill, P Baldi, D Van Vranken - 2024 - openreview.net
In recent years, machine learning based methods for chemical reaction prediction have
garnered significant interest due to the time consuming and resource intensive nature of …

[PDF][PDF] OrbNet-Spin: Quantum Mechanics Informed Geometric Deep Learning For Open-shell Systems

BS Kang, M Tavakoli, VC Bhethanabotla… - ml4physicalsciences.github.io
Modern quantum chemical methods involve a trade-off between accuracy and
computational cost/complexity. As an alternative, deep learning methods are used as …