Tumour heterogeneity and metastasis at single-cell resolution

DA Lawson, K Kessenbrock, RT Davis… - Nature cell …, 2018 - nature.com
Tumours comprise a heterogeneous collection of cells with distinct genetic and phenotypic
properties that can differentially promote progression, metastasis and drug resistance …

Revealing the vectors of cellular identity with single-cell genomics

A Wagner, A Regev, N Yosef - Nature biotechnology, 2016 - nature.com
Single-cell genomics has now made it possible to create a comprehensive atlas of human
cells. At the same time, it has reopened definitions of a cell's identity and of the ways in …

Pan-cancer genome and transcriptome analyses of 1,699 paediatric leukaemias and solid tumours

X Ma, YU Liu, Y Liu, LB Alexandrov, MN Edmonson… - Nature, 2018 - nature.com
Abstract Analysis of molecular aberrations across multiple cancer types, known as pan-
cancer analysis, identifies commonalities and differences in key biological processes that …

Single-cell transcriptomics meets lineage tracing

L Kester, A Van Oudenaarden - Cell stem cell, 2018 - cell.com
Reconstructing lineage relationships between cells within a tissue or organism is a long-
standing aim in biology. Traditionally, lineage tracing has been achieved through the …

Advancing cancer research and medicine with single-cell genomics

B Lim, Y Lin, N Navin - Cancer cell, 2020 - cell.com
Single-cell sequencing (SCS) has impacted many areas of cancer research and improved
our understanding of intratumor heterogeneity, the tumor microenvironment, metastasis, and …

The human cell atlas

A Regev, SA Teichmann, ES Lander, I Amit, C Benoist… - elife, 2017 - elifesciences.org
The recent advent of methods for high-throughput single-cell molecular profiling has
catalyzed a growing sense in the scientific community that the time is ripe to complete the …

Single-cell genome sequencing at ultra-high-throughput with microfluidic droplet barcoding

F Lan, B Demaree, N Ahmed, AR Abate - Nature biotechnology, 2017 - nature.com
The application of single-cell genome sequencing to large cell populations has been
hindered by technical challenges in isolating single cells during genome preparation. Here …

Tumor evolution: Linear, branching, neutral or punctuated?

A Davis, R Gao, N Navin - Biochimica et Biophysica Acta (BBA)-Reviews …, 2017 - Elsevier
Intratumor heterogeneity has been widely reported in human cancers, but our knowledge of
how this genetic diversity emerges over time remains limited. A central challenge in studying …

Clonal decomposition and DNA replication states defined by scaled single-cell genome sequencing

E Laks, A McPherson, H Zahn, D Lai, A Steif, J Brimhall… - Cell, 2019 - cell.com
Accurate measurement of clonal genotypes, mutational processes, and replication states
from individual tumor-cell genomes will facilitate improved understanding of tumor evolution …

Computational immunogenomic approaches to predict response to cancer immunotherapies

V Addala, F Newell, JV Pearson, A Redwood… - Nature Reviews …, 2024 - nature.com
Cancer immunogenomics is an emerging field that bridges genomics and immunology. The
establishment of large-scale genomic collaborative efforts along with the development of …