Crop phenomics and high-throughput phenotyping: past decades, current challenges, and future perspectives

W Yang, H Feng, X Zhang, J Zhang, JH Doonan… - Molecular plant, 2020 - cell.com
Since whole-genome sequencing of many crops has been achieved, crop functional
genomics studies have stepped into the big-data and high-throughput era. However …

[HTML][HTML] Plant phenomics, from sensors to knowledge

F Tardieu, L Cabrera-Bosquet, T Pridmore, M Bennett - Current Biology, 2017 - cell.com
Major improvements in crop yield are needed to keep pace with population growth and
climate change. While plant breeding efforts have greatly benefited from advances in …

Lidar sheds new light on plant phenomics for plant breeding and management: Recent advances and future prospects

S Jin, X Sun, F Wu, Y Su, Y Li, S Song, K Xu… - ISPRS Journal of …, 2021 - Elsevier
Plant phenomics is a new avenue for linking plant genomics and environmental studies,
thereby improving plant breeding and management. Remote sensing techniques have …

Phenomics–technologies to relieve the phenotyping bottleneck

RT Furbank, M Tester - Trends in plant science, 2011 - cell.com
Global agriculture is facing major challenges to ensure global food security, such as the
need to breed high-yielding crops adapted to future climates and the identification of …

Plant phenotyping: from bean weighing to image analysis

A Walter, F Liebisch, A Hund - Plant methods, 2015 - Springer
Plant phenotyping refers to a quantitative description of the plant's anatomical,
ontogenetical, physiological and biochemical properties. Today, rapid developments are …

Future scenarios for plant phenotyping

F Fiorani, U Schurr - Annual review of plant biology, 2013 - annualreviews.org
With increasing demand to support and accelerate progress in breeding for novel traits, the
plant research community faces the need to accurately measure increasingly large numbers …

Dissecting the phenotypic components of crop plant growth and drought responses based on high-throughput image analysis

D Chen, K Neumann, S Friedel, B Kilian, M Chen… - The plant …, 2014 - academic.oup.com
Significantly improved crop varieties are urgently needed to feed the rapidly growing human
population under changing climates. While genome sequence information and excellent …

Single-molecule sequencing and optical mapping yields an improved genome of woodland strawberry (Fragaria vesca) with chromosome-scale contiguity

PP Edger, R VanBuren, M Colle, TJ Poorten… - …, 2018 - academic.oup.com
Background Although draft genomes are available for most agronomically important plant
species, the majority are incomplete, highly fragmented, and often riddled with assembly …

Finely-grained annotated datasets for image-based plant phenotyping

M Minervini, A Fischbach, H Scharr… - Pattern recognition letters, 2016 - Elsevier
Image-based approaches to plant phenotyping are gaining momentum providing fertile
ground for several interesting vision tasks where fine-grained categorization is necessary …

Leaf segmentation in plant phenotyping: a collation study

H Scharr, M Minervini, AP French, C Klukas… - Machine vision and …, 2016 - Springer
Image-based plant phenotyping is a growing application area of computer vision in
agriculture. A key task is the segmentation of all individual leaves in images. Here we focus …