The integrated stress response

K Pakos‐Zebrucka, I Koryga, K Mnich, M Ljujic… - EMBO …, 2016 - embopress.org
In response to diverse stress stimuli, eukaryotic cells activate a common adaptive pathway,
termed the integrated stress response (ISR), to restore cellular homeostasis. The core event …

Role of eIF2α kinases in translational control and adaptation to cellular stress

RC Wek - Cold Spring Harbor perspectives in biology, 2018 - cshperspectives.cshlp.org
A central mechanism regulating translation initiation in response to environmental stress
involves phosphorylation of the α subunit of eukaryotic initiation factor 2 (eIF2α) …

Translational regulation by uORFs and start codon selection stringency

TE Dever, IP Ivanov, AG Hinnebusch - Genes & development, 2023 - genesdev.cshlp.org
In addition to the main, protein-coding, open reading frame (mORF), many eukaryotic
mRNAs contain upstream ORFs (uORFs) initiated at AUG or near-cognate codons residing …

Incomplete penetrance and variable expressivity: from clinical studies to population cohorts

R Kingdom, CF Wright - Frontiers in Genetics, 2022 - frontiersin.org
The same genetic variant found in different individuals can cause a range of diverse
phenotypes, from no discernible clinical phenotype to severe disease, even among related …

Alternative ORFs and small ORFs: shedding light on the dark proteome

MW Orr, Y Mao, G Storz, SB Qian - Nucleic acids research, 2020 - academic.oup.com
Traditional annotation of protein-encoding genes relied on assumptions, such as one open
reading frame (ORF) encodes one protein and minimal lengths for translated proteins. With …

A stay of execution: ATF4 regulation and potential outcomes for the integrated stress response

G Neill, GR Masson - Frontiers in Molecular Neuroscience, 2023 - frontiersin.org
ATF4 is a cellular stress induced bZIP transcription factor that is a hallmark effector of the
integrated stress response. The integrated stress response is triggered by phosphorylation …

Upstream open reading frames differentially regulate gene-specific translation in the integrated stress response

SK Young, RC Wek - Journal of Biological Chemistry, 2016 - ASBMB
Translation regulation largely occurs during initiation, which features ribosome assembly
onto mRNAs and selection of the translation start site. Short, upstream ORFs (uORFs) …

Regulation of cytokine production by the unfolded protein response; implications for infection and autoimmunity

JA Smith - Frontiers in immunology, 2018 - frontiersin.org
Protein folding in the endoplasmic reticulum (ER) is an essential cell function. To safeguard
this process in the face of environmental threats and internal stressors, cells mount an …

Conserved upstream open reading frame nascent peptides that control translation

TE Dever, IP Ivanov, MS Sachs - Annual review of genetics, 2020 - annualreviews.org
Cells utilize transcriptional and posttranscriptional mechanisms to alter gene expression in
response to environmental cues. Gene-specific controls, including changing the translation …

The regulation of ascorbate biosynthesis

S Bulley, W Laing - Current Opinion in Plant Biology, 2016 - Elsevier
Highlights•Ascorbate is an essential reductant/antioxidant in plants.•The concentration of
ascorbate varies between plant tissues and different plants.•GDP-galactose phosphorylase …