Ribosome biogenesis factors—from names to functions

K Dörner, C Ruggeri, I Zemp, U Kutay - The EMBO journal, 2023 - embopress.org
The assembly of ribosomal subunits is a highly orchestrated process that involves a huge
cohort of accessory factors. Most eukaryotic ribosome biogenesis factors were first identified …

Ribosome assembly coming into focus

S Klinge, JL Woolford Jr - Nature reviews Molecular cell biology, 2019 - nature.com
In the past 25 years, genetic and biochemical analyses of ribosome assembly in yeast have
identified most of the factors that participate in this complex pathway and have generated …

Eukaryotic ribosome assembly, transport and quality control

C Peña, E Hurt, VG Panse - Nature structural & molecular biology, 2017 - nature.com
Eukaryotic ribosome synthesis is a complex, energy-consuming process that takes place
across the nucleolus, nucleoplasm and cytoplasm and requires more than 200 conserved …

Advances in targeted proteomics and applications to biomedical research

T Shi, E Song, S Nie, KD Rodland, T Liu, WJ Qian… - …, 2016 - Wiley Online Library
Targeted proteomics technique has emerged as a powerful protein quantification tool in
systems biology, biomedical research, and increasing for clinical applications. The most …

Application of targeted mass spectrometry in bottom-up proteomics for systems biology research

NP Manes, A Nita-Lazar - Journal of proteomics, 2018 - Elsevier
The enormous diversity of proteoforms produces tremendous complexity within cellular
proteomes, facilitates intricate networks of molecular interactions, and constitutes a …

Architecture of the Rix1–Rea1 checkpoint machinery during pre-60S-ribosome remodeling

C Barrio-Garcia, M Thoms, D Flemming… - Nature structural & …, 2016 - nature.com
Ribosome synthesis is catalyzed by∼ 200 assembly factors, which facilitate efficient
production of mature ribosomes. Here, we determined the cryo-EM structure of a …

Eukaryotic ribosome assembly and nuclear export

P Nerurkar, M Altvater, S Gerhardy, S Schütz… - International review of …, 2015 - Elsevier
Accurate translation of the genetic code into functional polypeptides is key to cellular growth
and proliferation. This essential process is carried out by the ribosome, a ribonucleoprotein …

Insertion of the biogenesis factor Rei1 probes the ribosomal tunnel during 60S maturation

BJ Greber, S Gerhardy, A Leitner, M Leibundgut… - Cell, 2016 - cell.com
Eukaryotic ribosome biogenesis depends on several hundred assembly factors to produce
functional 40S and 60S ribosomal subunits. The final phase of 60S subunit biogenesis is …

Principles of 60S ribosomal subunit assembly emerging from recent studies in yeast

S Konikkat, JL Woolford Jr - Biochemical Journal, 2017 - portlandpress.com
Ribosome biogenesis requires the intertwined processes of folding, modification, and
processing of ribosomal RNA, together with binding of ribosomal proteins. In eukaryotic …

A single 2′-O-methylation of ribosomal RNA gates assembly of a functional ribosome

JN Yelland, JPK Bravo, JJ Black, DW Taylor… - Nature Structural & …, 2023 - nature.com
RNA modifications are widespread in biology and abundant in ribosomal RNA. However,
the importance of these modifications is not well understood. We show that methylation of a …