Genotyping errors: causes, consequences and solutions
F Pompanon, A Bonin, E Bellemain… - Nature Reviews …, 2005 - nature.com
Although genotyping errors affect most data and can markedly influence the biological
conclusions of a study, they are too often neglected. Errors have various causes, but their …
conclusions of a study, they are too often neglected. Errors have various causes, but their …
ecoPrimers: inference of new DNA barcode markers from whole genome sequence analysis
Using non-conventional markers, DNA metabarcoding allows biodiversity assessment from
complex substrates. In this article, we present ecoPrimers, a software for identifying new …
complex substrates. In this article, we present ecoPrimers, a software for identifying new …
Genome-wide RNAi screening in Caenorhabditis elegans
RS Kamath, J Ahringer - Methods, 2003 - Elsevier
In Caenorhabditis elegans, introduction of double-stranded RNA (dsRNA) results in the
specific inactivation of an endogenous gene with corresponding sequence; this technique is …
specific inactivation of an endogenous gene with corresponding sequence; this technique is …
Power and limitations of the chloroplast trn L (UAA) intron for plant DNA barcoding
DNA barcoding should provide rapid, accurate and automatable species identifications by
using a standardized DNA region as a tag. Based on sequences available in GenBank and …
using a standardized DNA region as a tag. Based on sequences available in GenBank and …
New structural and mechanistic insight into the A-rule and the instructional and non-instructional behavior of DNA photoproducts and other lesions
JS Taylor - … Research/Fundamental and Molecular Mechanisms of …, 2002 - Elsevier
The A-rule in mutagenesis was originally proposed to explain the preponderance of X→ T
mutations observed for abasic sites and UV damaged sites. It was deduced that when a …
mutations observed for abasic sites and UV damaged sites. It was deduced that when a …
Carnivore diet analysis based on next‐generation sequencing: application to the leopard cat (Prionailurus bengalensis) in Pakistan
Diet analysis is a prerequisite to fully understand the biology of a species and the
functioning of ecosystems. For carnivores, traditional diet analyses mostly rely upon the …
functioning of ecosystems. For carnivores, traditional diet analyses mostly rely upon the …
New perspectives in diet analysis based on DNA barcoding and parallel pyrosequencing: the trnL approach
A Valentini, C Miquel, MA Nawaz… - Molecular ecology …, 2009 - Wiley Online Library
The development of DNA barcoding (species identification using a standardized DNA
sequence), and the availability of recent DNA sequencing techniques offer new possibilities …
sequence), and the availability of recent DNA sequencing techniques offer new possibilities …
[HTML][HTML] Analysing diet of small herbivores: the efficiency of DNA barcoding coupled with high-throughput pyrosequencing for deciphering the composition of complex …
Background In order to understand the role of herbivores in trophic webs, it is essential to
know what they feed on. Diet analysis is, however, a challenge in many small herbivores …
know what they feed on. Diet analysis is, however, a challenge in many small herbivores …
Taq DNA polymerase slippage mutation rates measured by PCR and quasi‐likelihood analysis: (CA/GT)n and (A/T)n microsatellites
During microsatellite polymerase chain reaction (PCR), insertion–deletion mutations
produce stutter products differing from the original template by multiples of the repeat unit …
produce stutter products differing from the original template by multiples of the repeat unit …
B-cell receptor signaling and genetic lesions in TP53 and CDKN2A/CDKN2B cooperate in Richter transformation
S Chakraborty, C Martines, F Porro… - Blood, The Journal …, 2021 - ashpublications.org
B-cell receptor (BCR) signals play a critical role in the pathogenesis of chronic lymphocytic
leukemia (CLL), but their role in regulating CLL cell proliferation has still not been firmly …
leukemia (CLL), but their role in regulating CLL cell proliferation has still not been firmly …