Intracellular mRNA transport and localized translation

S Das, M Vera, V Gandin, RH Singer… - Nature reviews Molecular …, 2021 - nature.com
Fine-tuning cellular physiology in response to intracellular and environmental cues requires
precise temporal and spatial control of gene expression. High-resolution imaging …

Illuminating RNA biology: tools for imaging RNA in live mammalian cells

E Braselmann, C Rathbun, EM Richards… - Cell chemical biology, 2020 - cell.com
The central dogma teaches us that DNA makes RNA, which in turn makes proteins, the main
building blocks of the cell. But this over simplified linear transmission of information …

[HTML][HTML] Single-molecule imaging reveals translation of mRNAs localized to stress granules

D Mateju, B Eichenberger, F Voigt, J Eglinger, G Roth… - Cell, 2020 - cell.com
Cellular stress leads to reprogramming of mRNA translation and formation of stress granules
(SGs), membraneless organelles consisting of mRNA and RNA-binding proteins. Although …

Direct observation of translational activation by a ribonucleoprotein granule

R Chen, W Stainier, J Dufourt, M Lagha… - Nature Cell …, 2024 - nature.com
Biomolecular condensates organize biochemical processes at the subcellular level and can
provide spatiotemporal regulation within a cell. Among these, ribonucleoprotein (RNP) …

A dual protein-mRNA localization screen reveals compartmentalized translation and widespread co-translational RNA targeting

R Chouaib, A Safieddine, X Pichon, A Imbert… - Developmental cell, 2020 - cell.com
Local translation allows spatial control of gene expression. Here, we performed a dual
protein-mRNA localization screen, using smFISH on 523 human cell lines expressing GFP …

Single-molecule imaging of mRNA localization and regulation during the integrated stress response

JH Wilbertz, F Voigt, I Horvathova, G Roth, Y Zhan… - Molecular cell, 2019 - cell.com
Biological phase transitions form membrane-less organelles that generate distinct cellular
environments. How molecules are partitioned between these compartments and the …

A genetically encoded probe for imaging nascent and mature HA-tagged proteins in vivo

N Zhao, K Kamijo, PD Fox, H Oda, T Morisaki… - Nature …, 2019 - nature.com
To expand the toolbox of imaging in living cells, we have engineered a single-chain variable
fragment binding the linear HA epitope with high affinity and specificity in vivo. The resulting …

Spatial omics advances for in situ RNA biology

J Ren, S Luo, H Shi, X Wang - Molecular Cell, 2024 - cell.com
Spatial regulation of RNA plays a critical role in gene expression regulation and cellular
function. Understanding spatially resolved RNA dynamics and translation is vital for bringing …

[HTML][HTML] Ribosome heterogeneity in stem cells and development

D Li, J Wang - Journal of Cell Biology, 2020 - rupress.org
Translation control is critical to regulate protein expression. By directly adjusting protein
levels, cells can quickly respond to dynamic transitions during stem cell differentiation and …

Calibrated ribosome profiling assesses the dynamics of ribosomal flux on transcripts

K Tomuro, M Mito, H Toh, N Kawamoto… - Nature …, 2024 - nature.com
Ribosome profiling, which is based on deep sequencing of ribosome footprints, has served
as a powerful tool for elucidating the regulatory mechanism of protein synthesis. However …