High throughput sequencing for plant virus detection and discovery
Over the last decade, virologists have discovered an unprecedented number of viruses
using high throughput sequencing (HTS), which led to the advancement of our knowledge …
using high throughput sequencing (HTS), which led to the advancement of our knowledge …
The human intestinal virome in health and disease
SR Carding, N Davis, L Hoyles - Alimentary pharmacology & …, 2017 - Wiley Online Library
Background The human virome consists of animal‐cell viruses causing transient infections,
bacteriophage (phage) predators of bacteria and archaea, endogenous retroviruses and …
bacteriophage (phage) predators of bacteria and archaea, endogenous retroviruses and …
The role of viruses in identifying and analyzing RNA silencing
DC Baulcombe - Annual Review of Virology, 2022 - annualreviews.org
Adaptive antiviral immunity in plants is an RNA-based mechanism in which small RNAs
derived from both strands of the viral RNA are guides for an Argonaute (AGO) nuclease. The …
derived from both strands of the viral RNA are guides for an Argonaute (AGO) nuclease. The …
Human virome and disease: high-throughput sequencing for virus discovery, identification of phage-bacteria dysbiosis and development of therapeutic approaches …
TM Santiago-Rodriguez, EB Hollister - Viruses, 2019 - mdpi.com
The virome is comprised of endogenous retroviruses, eukaryotic viruses, and
bacteriophages and is increasingly being recognized as an essential part of the human …
bacteriophages and is increasingly being recognized as an essential part of the human …
V-pipe: a computational pipeline for assessing viral genetic diversity from high-throughput data
S Posada-Céspedes, D Seifert, I Topolsky… - …, 2021 - academic.oup.com
Motivation High-throughput sequencing technologies are used increasingly not only in viral
genomics research but also in clinical surveillance and diagnostics. These technologies …
genomics research but also in clinical surveillance and diagnostics. These technologies …
The bumblebee Bombus terrestris carries a primary inoculum of Tomato brown rugose fruit virus contributing to disease spread in tomatoes
N Levitzky, E Smith, O Lachman, N Luria, Y Mizrahi… - PloS one, 2019 - journals.plos.org
The bumblebee Bombus terrestris is a beneficial pollinator extensively used in tomato
production. Our hypothesis was that bumblebee hives collected from a Tomato brown …
production. Our hypothesis was that bumblebee hives collected from a Tomato brown …
[图书][B] Encyclopedia of plant viruses and viroids
KS Sastry, B Mandal, J Hammond, SW Scott… - 2019 - Springer
APLV infection in plants of Ullucus tuberosus was reported from Peru (Lizarraga et al.
1996a). The virus-infected ulluco plants do not exhibit any symptoms. The virus is …
1996a). The virus-infected ulluco plants do not exhibit any symptoms. The virus is …
Small RNA-omics for plant virus identification, virome reconstruction, and antiviral defense characterization
MM Pooggin - Frontiers in microbiology, 2018 - frontiersin.org
RNA interference (RNAi)-based antiviral defense generates small interfering RNAs that
represent the entire genome sequences of both RNA and DNA viruses as well as viroids …
represent the entire genome sequences of both RNA and DNA viruses as well as viroids …
A primer on the analysis of high-throughput sequencing data for detection of plant viruses
High-throughput sequencing (HTS) technologies have become indispensable tools
assisting plant virus diagnostics and research thanks to their ability to detect any plant virus …
assisting plant virus diagnostics and research thanks to their ability to detect any plant virus …
Viral diagnostics in plants using next generation sequencing: computational analysis in practice
S Jones, A Baizan-Edge, S MacFarlane… - Frontiers in plant …, 2017 - frontiersin.org
Viruses cause significant yield and quality losses in a wide variety of cultivated crops.
Hence, the detection and identification of viruses is a crucial facet of successful crop …
Hence, the detection and identification of viruses is a crucial facet of successful crop …