Molecular networks in Network Medicine: Development and applications

EK Silverman, HHHW Schmidt… - … Systems Biology and …, 2020 - Wiley Online Library
Network Medicine applies network science approaches to investigate disease
pathogenesis. Many different analytical methods have been used to infer relevant molecular …

Deep learning in systems medicine

H Wang, E Pujos-Guillot, B Comte… - Briefings in …, 2021 - academic.oup.com
Abstract Systems medicine (SM) has emerged as a powerful tool for studying the human
body at the systems level with the aim of improving our understanding, prevention and …

Network analysis reveals rare disease signatures across multiple levels of biological organization

P Buphamalai, T Kokotovic, V Nagy… - Nature communications, 2021 - nature.com
Rare genetic diseases are typically caused by a single gene defect. Despite this clear
causal relationship between genotype and phenotype, identifying the pathobiological …

Proteomic studies of common chronic pain conditions-a systematic review and associated network analyses

B Gerdle, B Ghafouri - Expert Review of Proteomics, 2020 - Taylor & Francis
Introduction The lack of biomarkers indicating involved nociceptive and/or pain mechanisms
makes diagnostic procedures problematic. Clinical pain research has begun to use …

An early stage researcher's primer on systems medicine terminology

M Zanin, NAA Aitya, J Basilio, J Baumbach… - Network and systems …, 2021 - liebertpub.com
Background: Systems Medicine is a novel approach to medicine, that is, an interdisciplinary
field that considers the human body as a system, composed of multiple parts and of complex …

Mechanistic modeling and multiscale applications for precision medicine: theory and practice

E Stalidzans, M Zanin, P Tieri, F Castiglione… - Network and systems …, 2020 - liebertpub.com
Drug research, therapy development, and other areas of pharmacology and medicine can
benefit from simulations and optimization of mathematical models that contain a …

Quantitative systems toxicology modeling to address key safety questions in drug development: a focus of the TransQST consortium

S Ferreira, C Fisher, LI Furlong… - Chemical Research …, 2020 - ACS Publications
Omics data have been increasingly generated with limited demonstrated value in drug
safety assessment. The TransQST consortium was launched to use omics and other data in …

[HTML][HTML] Changes in inflammatory plasma proteins from patients with chronic pain associated with treatment in an interdisciplinary multimodal rehabilitation program …

B Gerdle, E Bäckryd, T Falkenberg… - … Journal of Pain, 2020 - degruyter.com
It has been suggested that alterations in inflammation molecules maintain chronic pain
although little is known about how these factors influence homeostatic and inflammatory …

[PDF][PDF] Shift in the paradigm towards next-generation microbiology

B Stres, L Kronegger - FEMS Microbiology Letters, 2019 - academic.oup.com
In this work, the position of contemporary microbiology is considered from the perspective of
scientific success, and a list of historical points and lessons learned from the fields of …

Predictive radiation oncology–a new NCI–DOE scientific space and community

JC Buchsbaum, DA Jaffray, D Ba, LL Borkon, C Chalk… - 2022 - meridian.allenpress.com
With a widely attended virtual kickoff event on January 29, 2021, the National Cancer
Institute (NCI) and the Department of Energy (DOE) launched a series of 4 interactive …