In recent years the amount of experimental data that is produced in biomedical research and
the number of papers that are being published in this field have grown rapidly. In order to …

Text mining is an important research direction, which involves several fields, such as
information retrieval, information extraction, and text categorization. In this paper, we …

The main result of a great deal of the published proteomics studies is a list of identified
proteins, which then needs to be interpreted in relation to the research question and existing …

Identifying biological functions and molecular networks in a gene list and how the genes
may relate to various topics is of considerable value to biomedical researchers. Here, we …

Recent studies suggest that combining nivolumab with ipilimumab is a more effective
treatment for melanoma patients, compared to using ipilimumab or nivolumab alone …

Background: Both genetic and environmental factors contribute to the development of
periodontitis. Genetic studies identified a variety of candidate genes for periodontitis. The …

Numerous gene sets have been used as molecular signatures for exploring the genetic
basis of complex disorders. These gene sets are distinct but related to each other in many …

Progress in high-throughput genomic technologies has led to the development of a variety of
resources that link genes to functional information contained in the biomedical literature …

A routine approach to inferring functions for a gene set is by using function enrichment
analysis based on GO, KEGG or other curated terms and pathways. However, such analysis …

As the amount of genome information increases rapidly, there is a correspondingly greater
need for methods that provide accurate and automated annotation of gene function. For …