IHR Yoon, R Jenkins, E Colliver, H Zhang, D Novo… - bioRxiv, 2024 - biorxiv.org
Extracellular matrix (ECM) organization influences cancer development and progression. It modulates the invasion of cancer cells and can hinder the access of immune cells to cancer …
The chromatic alpha filtration is a generalization of the alpha filtration that can encode spatial relationships among classes of labelled point cloud data, and has applications in …
E Song - Frontiers in Genetics, 2023 - frontiersin.org
Genome-wide association studies (GWAS) involving increasing sample sizes have identified hundreds of genetic variants associated with complex diseases, such as type 2 diabetes …
Motivated by applications in medical sciences, we study finite chromatic sets in Euclidean space from a topological perspective. Based on persistent homology for images, kernels and …
EG Escolar, W Kim - arXiv preprint arXiv:2412.04995, 2024 - arxiv.org
The persistence barcode (equivalently, the persistence diagram), which can be obtained from the interval decomposition of a persistence module, plays a pivotal role in applications …
Exploring the shape of point configurations has been a key driver in the evolution of TDA (short for topological data analysis) since its infancy. This survey illustrates the recent efforts …
IHR Yoon - arXiv preprint arXiv:2408.13136, 2024 - arxiv.org
The intent of this paper is to explore Dowker duality from a combinatorial, topological, and categorical perspective. The paper presents three short, new proofs of Dowker duality using …
M Swan, T Kido, RP dos Santos - 2025 - researchgate.net
Categorical Longevity is introduced as a computational systems biology approach which applies category theory to unify and formalize the activity, metrics, and interventions of …