[PDF][PDF] Chromatic alpha complexes

SC di Montesano, O Draganov… - arXiv preprint arXiv …, 2024 - researchgate.net
Motivated by applications in the sciences, we study finite chromatic sets in Euclidean space
from a topological perspective. Based on the persistent homology for images, kernels and …

Deciphering the diversity and sequence of extracellular matrix and cellular spatial patterns in lung adenocarcinoma using topological data analysis

IHR Yoon, R Jenkins, E Colliver, H Zhang, D Novo… - bioRxiv, 2024 - biorxiv.org
Extracellular matrix (ECM) organization influences cancer development and progression. It
modulates the invasion of cancer cells and can hinder the access of immune cells to cancer …

Morse theory for chromatic Delaunay triangulations

A Natarajan, T Chaplin, A Brown… - arXiv preprint arXiv …, 2024 - arxiv.org
The chromatic alpha filtration is a generalization of the alpha filtration that can encode
spatial relationships among classes of labelled point cloud data, and has applications in …

Persistent homology analysis of type 2 diabetes genome-wide association studies in protein–protein interaction networks

E Song - Frontiers in Genetics, 2023 - frontiersin.org
Genome-wide association studies (GWAS) involving increasing sample sizes have identified
hundreds of genetic variants associated with complex diseases, such as type 2 diabetes …

[PDF][PDF] Persistent homology of chromatic alpha complexes

SC di Montesano, O Draganov… - arXiv preprint arXiv …, 2022 - academia.edu
Motivated by applications in medical sciences, we study finite chromatic sets in Euclidean
space from a topological perspective. Based on persistent homology for images, kernels and …

Barcoding Invariants and Their Equivalent Discriminating Power

EG Escolar, W Kim - arXiv preprint arXiv:2412.04995, 2024 - arxiv.org
The persistence barcode (equivalently, the persistence diagram), which can be obtained
from the interval decomposition of a persistence module, plays a pivotal role in applications …

Chromatic Topological Data Analysis

SC di Montesano, O Draganov, H Edelsbrunner… - arXiv preprint arXiv …, 2024 - arxiv.org
Exploring the shape of point configurations has been a key driver in the evolution of TDA
(short for topological data analysis) since its infancy. This survey illustrates the recent efforts …

Dowker duality, profunctors, and spectral sequences

IHR Yoon - arXiv preprint arXiv:2408.13136, 2024 - arxiv.org
The intent of this paper is to explore Dowker duality from a combinatorial, topological, and
categorical perspective. The paper presents three short, new proofs of Dowker duality using …

[PDF][PDF] Categorical Longevity: Category Theory & Computational Biology Well-being

M Swan, T Kido, RP dos Santos - 2025 - researchgate.net
Categorical Longevity is introduced as a computational systems biology approach which
applies category theory to unify and formalize the activity, metrics, and interventions of …