FPGA-based accelerators are demonstrating significant absolute performance and energy
efficiency compared with general-purpose CPUs. While FPGA computations can now be …

Metagenomics, the study of the genome sequences of diverse organisms in a common
environment, has led to significant advances in many fields. Since the species present in a …

This work seeks to leverage Processing-with-storage-technology (PWST) to accelerate a key
bioinformatics kernel called k-mer counting, which involves processing large files of …

In genome analysis, it is often important to identify variants from a reference genome.
However, identifying variants that occur with low frequency can be challenging, as it is …

Since the last decade, the main components of computer systems have been evolving,
diversifying, to overcome their physical limits and to minimize their energy footprint …