Best practices in metabarcoding of fungi: from experimental design to results

L Tedersoo, M Bahram, L Zinger, RH Nilsson… - Molecular …, 2022 - Wiley Online Library
The development of high‐throughput sequencing (HTS) technologies has greatly improved
our capacity to identify fungi and unveil their ecological roles across a variety of ecosystems …

An in vitro batch fermentation protocol for studying the contribution of food to gut microbiota composition and functionality

S Pérez-Burillo, S Molino, B Navajas-Porras… - Nature …, 2021 - nature.com
Abstract Knowledge of the effect of foods on gut microbiota composition and functionality is
expanding. To isolate the effect of single foods and/or single nutrients (ie, fiber …

Meta-analysis of the impacts of global change factors on soil microbial diversity and functionality

Z Zhou, C Wang, Y Luo - Nature communications, 2020 - nature.com
Biodiversity on the Earth is changing at an unprecedented rate due to a variety of global
change factors (GCFs). However, the effects of GCFs on microbial diversity is unclear …

Organic amendments enhance soil microbial diversity, microbial functionality and crop yields: A meta-analysis

X Shu, J He, Z Zhou, L Xia, Y Hu, Y Zhang… - Science of the Total …, 2022 - Elsevier
Fertilization plays an important role in changing soil microbial diversity, which is essential for
determining crop yields. Yet, the influence of organic amendments on microbial diversity …

Correlation and association analyses in microbiome study integrating multiomics in health and disease

Y Xia - Progress in molecular biology and translational …, 2020 - Elsevier
Correlation and association analyses are one of the most widely used statistical methods in
research fields, including microbiome and integrative multiomics studies. Correlation and …

Analysing microbial community composition through amplicon sequencing: from sampling to hypothesis testing

LW Hugerth, AF Andersson - Frontiers in microbiology, 2017 - frontiersin.org
Microbial ecology as a scientific field is fundamentally driven by technological advance. The
past decade's revolution in DNA sequencing cost and throughput has made it possible for …

Applications of artificial intelligence in anaerobic co-digestion: Recent advances and prospects

M Khan, W Chuenchart, KC Surendra, SK Khanal - Bioresource technology, 2023 - Elsevier
Anaerobic co-digestion (AcoD) offers several merits such as better digestibility and process
stability while enhancing methane yield due to synergistic effects. Operation of an efficient …

Active microbial communities during biodegradation of biodegradable plastics by mesophilic and thermophilic anaerobic digestion

G Cazaudehore, F Monlau, C Gassie… - Journal of Hazardous …, 2023 - Elsevier
Biodegradable plastics, if they are not properly managed at their end-of-life, can have the
same hazardous environmental consequences as conventional plastics. This study …

Impact of Municipal Solid Waste Landfill leachate on groundwater quality in Varanasi, India.

S Mishra, D Tiwary, A Ohri, AK Agnihotri - Groundwater for Sustainable …, 2019 - Elsevier
This study assesses the impact of municipal solid waste (MSW) landfill leachate on its
surrounding groundwater quality of village Ramna, Varanasi, India. Leachate pollution index …

Meta-analysis of the impact of freeze–thaw cycles on soil microbial diversity and C and N dynamics

X Ji, M Liu, J Yang, F Feng - Soil Biology and Biochemistry, 2022 - Elsevier
Reduction in snow cover is a prominent aspect of global change. Freeze–thaw cycles
(FTCs) of different amplitudes and durations in soil due to insufficient thermal insulation may …