[HTML][HTML] mRNA vaccines for COVID-19: what, why and how

JW Park, PNP Lagniton, Y Liu… - International journal of …, 2021 - ncbi.nlm.nih.gov
Abstract The Coronavirus disease-19 (COVID-19) pandemic, caused by severe acute
respiratory syndrome coronavirus-2 (SARS-CoV-2), has impacted human lives in the most …

Ribosome profiling: global views of translation

NT Ingolia, JA Hussmann… - Cold Spring Harbor …, 2019 - cshperspectives.cshlp.org
The translation of messenger RNA (mRNA) into protein and the folding of the resulting
protein into an active form are prerequisites for virtually every cellular process and represent …

Automated model-predictive design of synthetic promoters to control transcriptional profiles in bacteria

TL LaFleur, A Hossain, HM Salis - Nature communications, 2022 - nature.com
Transcription rates are regulated by the interactions between RNA polymerase, sigma factor,
and promoter DNA sequences in bacteria. However, it remains unclear how non-canonical …

[HTML][HTML] Genome-wide quantification of RNA flow across subcellular compartments reveals determinants of the mammalian transcript life cycle

R Ietswaart, BM Smalec, A Xu, K Choquet, E McShane… - Molecular Cell, 2024 - cell.com
Dissecting the regulatory mechanisms controlling mammalian transcripts from production to
degradation requires quantitative measurements of mRNA flow across the cell. We …

Regulation of gene expression in trypanosomatids: living with polycistronic transcription

C Clayton - Open biology, 2019 - royalsocietypublishing.org
In trypanosomes, RNA polymerase II transcription is polycistronic and individual mRNAs are
excised by trans-splicing and polyadenylation. The lack of individual gene transcription …

The Ccr4-Not complex monitors the translating ribosome for codon optimality

R Buschauer, Y Matsuo, T Sugiyama, YH Chen… - Science, 2020 - science.org
INTRODUCTION The tightly controlled process of gene expression requires messenger
RNAs (mRNAs), which represent DNA-derived blueprints for polypeptides, to be translated …

The genetic and biochemical determinants of mRNA degradation rates in mammals

V Agarwal, DR Kelley - Genome biology, 2022 - Springer
Background Degradation rate is a fundamental aspect of mRNA metabolism, and the factors
governing it remain poorly characterized. Understanding the genetic and biochemical …

GC content shapes mRNA storage and decay in human cells

M Courel, Y Clément, C Bossevain, D Foretek… - Elife, 2019 - elifesciences.org
mRNA translation and decay appear often intimately linked although the rules of this
interplay are poorly understood. In this study, we combined our recent P-body transcriptome …

Decoding mRNA translatability and stability from the 5′ UTR

L Jia, Y Mao, Q Ji, D Dersh, JW Yewdell… - Nature structural & …, 2020 - nature.com
Precise control of protein synthesis by engineering sequence elements in 5′ untranslated
regions (5′ UTRs) remains a fundamental challenge. To accelerate our understanding of …

Human OPRM1 and murine Oprm1 promoter driven viral constructs for genetic access to μ-opioidergic cell types

GJ Salimando, S Tremblay, BA Kimmey, J Li… - Nature …, 2023 - nature.com
With concurrent global epidemics of chronic pain and opioid use disorders, there is a critical
need to identify, target and manipulate specific cell populations expressing the mu-opioid …