[HTML][HTML] A modelling paradigm for RNA virus assembly

R Twarock, RJ Bingham, EC Dykeman… - Current opinion in …, 2018 - Elsevier
Highlights•Multiple, common dispersed packaging signals (PSs) promote RNA virus
assembly.•PS-mediated assembly solves a viral equivalent of Levinthal's Paradox.•RNA PSs …

Packaging of genomic RNA in positive-sense single-stranded RNA viruses: a complex story

M Comas-Garcia - Viruses, 2019 - mdpi.com
The packaging of genomic RNA in positive-sense single-stranded RNA viruses is a key part
of the viral infectious cycle, yet this step is not fully understood. Unlike double-stranded DNA …

A multiscale model of virus pandemic: Heterogeneous interactive entities in a globally connected world

N Bellomo, R Bingham, MAJ Chaplain… - … Models and Methods …, 2020 - World Scientific
This paper is devoted to the multidisciplinary modelling of a pandemic initiated by an
aggressive virus, specifically the so-called SARS–CoV–2 Severe Acute Respiratory …

Multiscale models of Covid-19 with mutations and variants

N Bellomo, D Burini, N Outada - Networks and Heterogeneous …, 2022 - aimsciences.org
This paper focuses on the multiscale modeling of the COVID-19 pandemic and presents
further developments of the model [7] with the aim of showing how relaxations of the …

RNA-mediated virus assembly: mechanisms and consequences for viral evolution and therapy

R Twarock, PG Stockley - Annual Review of Biophysics, 2019 - annualreviews.org
Viruses, entities composed of nucleic acids, proteins, and in some cases lipids lack the
ability to replicate outside their target cells. Their components self-assemble at the …

New trends on the systems approach to modeling SARS-CoV-2 pandemics in a globally connected planet

G Bertaglia, A Bondesan, D Burini, R Eftimie… - arXiv preprint arXiv …, 2024 - arxiv.org
This paper presents a critical analysis of the literature and perspective research ideas for
modeling the epidemics caused by the SARS-CoV-2 virus. It goes beyond deterministic …

Analysis of a within-host HIV/HTLV-I co-infection model with immunity

AM Elaiw, NH Alshamrani - Virus Research, 2021 - Elsevier
Human immunodeficiency virus (HIV) and human T-lymphotropic virus type I (HTLV-I) are
two retroviruses that attack the immune cells and impair their functions. Both HIV and HTLV-I …

Molecular frustration: a hypothesis for regulation of viral infections

R Twarock, GJ Towers, PG Stockley - Trends in Microbiology, 2024 - cell.com
The recent revolution in imaging techniques and results from RNA footprinting in situ reveal
how the bacteriophage MS2 genome regulates both particle assembly and genome release …

Berberine chloride is an alphavirus inhibitor that targets nucleocapsid assembly

JJ Wan, RS Brown, M Kielian - MBio, 2020 - Am Soc Microbiol
Alphaviruses are enveloped positive-sense RNA viruses that can cause serious human
illnesses such as polyarthritis and encephalitis. Despite their widespread distribution and …

[PDF][PDF] Mathematical modeling of HIV/HTLV co-infection with CTL-mediated immunity

AM Elaiw, NH Alshamrani, AD Hobiny - AIMS Math, 2021 - aimspress.com
In the literature, a great number of HIV and HTLV-I mono-infection models has been
formulated and analyzed. However, the within-host dynamics of HIV/HTLV-I co-infection has …