Mass spectrometry of nucleic acid noncovalent complexes

E Largy, A Konig, A Ghosh, D Ghosh… - Chemical …, 2021 - ACS Publications
Nucleic acids have been among the first targets for antitumor drugs and antibiotics. With the
unveiling of new biological roles in regulation of gene expression, specific DNA and RNA …

A review of enzyme induced carbonate precipitation (EICP): The role of enzyme kinetics

I Ahenkorah, MM Rahman, MR Karim, S Beecham… - Sustainable …, 2021 - mdpi.com
Enzyme-induced carbonate precipitation (EICP) is a relatively new bio-cementation
technique for ground improvement. In EICP, calcium carbonate (CaCO 3) precipitation …

Preclinical evaluation of the SARS-CoV-2 Mpro inhibitor RAY1216 shows improved pharmacokinetics compared with nirmatrelvir

X Chen, X Huang, Q Ma, P Kuzmič, B Zhou… - Nature …, 2024 - nature.com
Although vaccines are available for SARS-CoV-2, antiviral drugs such as nirmatrelvir are still
needed, particularly for individuals in whom vaccines are less effective, such as the …

A comprehensive guide for assessing covalent inhibition in enzymatic assays illustrated with kinetic simulations

E Mons, S Roet, RQ Kim, MPC Mulder - Current protocols, 2022 - Wiley Online Library
Covalent inhibition has become more accepted in the past two decades, as illustrated by the
clinical approval of several irreversible inhibitors designed to covalently modify their target …

Covalent EGFR inhibitor analysis reveals importance of reversible interactions to potency and mechanisms of drug resistance

PA Schwartz, P Kuzmic, J Solowiej… - Proceedings of the …, 2014 - National Acad Sciences
Covalent inhibition is a reemerging paradigm in kinase drug design, but the roles of inhibitor
binding affinity and chemical reactivity in overall potency are not well-understood. To …

Telomere DNA G-quadruplex folding within actively extending human telomerase

LI Jansson, J Hentschel, JW Parks… - Proceedings of the …, 2019 - National Acad Sciences
Telomerase reverse transcribes short guanine (G)-rich DNA repeat sequences from its
internal RNA template to maintain telomere length. G-rich telomere DNA repeats readily fold …

The small GTPases K-Ras, N-Ras, and H-Ras have distinct biochemical properties determined by allosteric effects

CW Johnson, D Reid, JA Parker, S Salter… - Journal of Biological …, 2017 - ASBMB
H-Ras, K-Ras, and N-Ras are small GTPases that are important in the control of cell
proliferation, differentiation, and survival, and their mutants occur frequently in human …

Construction and in vivo assembly of a catalytically proficient and hyperthermostable de novo enzyme

DW Watkins, JMX Jenkins, KJ Grayson, N Wood… - Nature …, 2017 - nature.com
Although catalytic mechanisms in natural enzymes are well understood, achieving the
diverse palette of reaction chemistries in re-engineered native proteins has proved …

Preparation of ultrasmall Ni2P nanoparticles with low P/Ni ratios supported on SiO2 and an Al2O3-B2O3 mixed oxide for dibenzothiophene hydrodesulfurization

S Chu, X Li, R Prins, C Wang, Y Liu, A Wang… - Journal of Catalysis, 2023 - Elsevier
Ultrasmall Ni 2 P nanoparticles with dimensions around 3∼ 5 nm supported on SiO 2 (Ni-
P/SiO 2) and an Al 2 O 3-B 2 O 3 mixed oxide (Ni-P/AB) were prepared by a temperature …

DNA damage detection in nucleosomes involves DNA register shifting

S Matsumoto, S Cavadini, RD Bunker, RS Grand… - Nature, 2019 - nature.com
Access to DNA packaged in nucleosomes is critical for gene regulation, DNA replication and
DNA repair. In humans, the UV-damaged DNA-binding protein (UV-DDB) complex detects …