Applications of microsatellites and single nucleotide polymorphisms for the genetic characterization of cattle and small ruminants: An overview

O Cortes, J Cañon, LT Gama - Ruminants, 2022 - mdpi.com
The status of genetic diversity, adaptation to climate change or the identification of genes
associated with traits of interest in livestock populations has been a major concern for …

[HTML][HTML] SNP 芯片评估柯尔克孜羊群体遗传多样性和遗传结构

李隐侠, 牙生江, 那斯尔, 赛里克, 都曼, 钱勇, 曹少先… - 畜牧兽医学报, 2023 - xml-data.org
旨在了解柯尔克孜羊群体的遗传多样性和遗传结构, 有效地保护和利用其遗传资源.
本研究利用绵羊SNP 50K v3 芯片检测61 只柯尔克孜种羊(31 只公羊, 30 只母羊) …

[HTML][HTML] Genomic inbreeding coefficients using imputed genotypes: Assessing different estimators in Holstein-Friesian dairy cows

C Dadousis, M Ablondi, C Cipolat-Gotet… - Journal of dairy …, 2022 - Elsevier
The objective of this study was to estimate inbreeding coefficients in Holstein dairy cattle
using imputed SNPs data. A data set of 95,540 Italian Holstein dairy cows from the routine …

Genome-wide landscape of runs of homozygosity and differentiation across Egyptian goat breeds

AM Sallam, H Reyer, K Wimmers, F Bertolini… - BMC genomics, 2023 - Springer
Understanding the genomic features of livestock is essential for successful breeding
programs and conservation. This information is scarce for local goat breeds in Egypt. In the …

[HTML][HTML] Heterozygosity and homozygosity regions affect reproductive success and the loss of reproduction: A case study with litter traits in pigs

Z Chen, Z Zhang, Z Wang, Z Zhang, Q Wang… - Computational and …, 2022 - Elsevier
Runs of heterozygosity (ROHet) and homozygosity (ROH) harbor useful information related
to traits of interest. There is a lack of investigating the effect of ROHet and ROH on …

Genomic prediction and genome-wide association study using combined genotypic data from different genotyping systems: application to apple fruit quality traits

MF Minamikawa, M Kunihisa, S Moriya… - Horticulture …, 2024 - academic.oup.com
With advances in next-generation sequencing technologies, various marker genotyping
systems have been developed for genomics-based approaches such as genomic selection …

Genome-wide estimates of runs of homozygosity, heterozygosity, and genetic load in two chinese indigenous goat breeds

G Li, J Tang, J Huang, Y Jiang, Y Fan, X Wang… - Frontiers in …, 2022 - frontiersin.org
Runs of homozygosity (ROH) and heterozygosity (ROHet) are windows into population
demographic history and adaptive evolution. Numerous studies have shown that deleterious …

Assessing population structure and signatures of selection in Wanbei pigs using whole genome resequencing data

W Zhang, L Liu, M Zhou, S Su, L Dong, X Meng, X Li… - Animals, 2022 - mdpi.com
Simple Summary The aim of this study was to perform whole-genome resequencing on
Wanbei pigs and combine its data with Asian wild boar sequencing data to assess their …

Examination of homozygosity runs and selection signatures in native goat breeds of Henan, China

W Peng, Y Zhang, L Gao, S Wang, M Liu, E Sun, K Lu… - BMC genomics, 2024 - Springer
Understanding the genomic characteristics of livestock is crucial for improving breeding
efficiency and conservation efforts. However, there is a relative lack of information on the …

The coefficients of inbreeding revealed by ROH study among inbred individuals belonging to each type of the first cousin marriage: A preliminary report from North …

R Fatma, W Chauhan, M Afzal - Genes & Genomics, 2023 - Springer
Background Genome-wide runs of homozygosity (ROH) are appropriate to estimate
genomic inbreeding, determine population history, unravel the genetic architecture of …