[HTML][HTML] Image harmonization: A review of statistical and deep learning methods for removing batch effects and evaluation metrics for effective harmonization

F Hu, AA Chen, H Horng, V Bashyam, C Davatzikos… - NeuroImage, 2023 - Elsevier
Magnetic resonance imaging and computed tomography from multiple batches (eg sites,
scanners, datasets, etc.) are increasingly used alongside complex downstream analyses to …

[HTML][HTML] A guide to the measurement and interpretation of fMRI test-retest reliability

S Noble, D Scheinost, RT Constable - Current opinion in behavioral …, 2021 - Elsevier
Highlights•Context is needed to appreciate recent reports of poor univariate fMRI
reliability.•We provide a guide to measuring and interpreting fMRI test-retest reliability via …

[HTML][HTML] Brain charts for the human lifespan

RAI Bethlehem, J Seidlitz, SR White, JW Vogel… - Nature, 2022 - nature.com
Over the past few decades, neuroimaging has become a ubiquitous tool in basic research
and clinical studies of the human brain. However, no reference standards currently exist to …

[HTML][HTML] Atlas of the aging mouse brain reveals white matter as vulnerable foci

O Hahn, AG Foltz, M Atkins, B Kedir, P Moran-Losada… - Cell, 2023 - cell.com
Aging is the key risk factor for cognitive decline, yet the molecular changes underlying brain
aging remain poorly understood. Here, we conducted spatiotemporal RNA sequencing of …

Classification of brain tumor from magnetic resonance imaging using vision transformers ensembling

S Tummala, S Kadry, SAC Bukhari, HT Rauf - Current Oncology, 2022 - mdpi.com
The automated classification of brain tumors plays an important role in supporting
radiologists in decision making. Recently, vision transformer (ViT)-based deep neural …

Braingb: a benchmark for brain network analysis with graph neural networks

H Cui, W Dai, Y Zhu, X Kan, AAC Gu… - IEEE transactions on …, 2022 - ieeexplore.ieee.org
Mapping the connectome of the human brain using structural or functional connectivity has
become one of the most pervasive paradigms for neuroimaging analysis. Recently, Graph …

Bias in machine learning models can be significantly mitigated by careful training: Evidence from neuroimaging studies

R Wang, P Chaudhari… - Proceedings of the …, 2023 - National Acad Sciences
Despite the great promise that machine learning has offered in many fields of medicine, it
has also raised concerns about potential biases and poor generalization across genders …

Cortical thickness across the lifespan: Data from 17,075 healthy individuals aged 3–90 years

S Frangou, A Modabbernia, SCR Williams… - Human brain …, 2022 - Wiley Online Library
Delineating the association of age and cortical thickness in healthy individuals is critical
given the association of cortical thickness with cognition and behavior. Previous research …

Artificial intelligence in brain MRI analysis of Alzheimer's disease over the past 12 years: A systematic review

TO Frizzell, M Glashutter, CC Liu, A Zeng, D Pan… - Ageing Research …, 2022 - Elsevier
Introduction Multiple structural brain changes in Alzheimer's disease (AD) and mild cognitive
impairment (MCI) have been revealed on magnetic resonance imaging (MRI). There is a fast …

Mitigating site effects in covariance for machine learning in neuroimaging data

AA Chen, JC Beer, NJ Tustison, PA Cook… - Human brain …, 2022 - Wiley Online Library
To acquire larger samples for answering complex questions in neuroscience, researchers
have increasingly turned to multi‐site neuroimaging studies. However, these studies are …